RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 RNASET2O00584 256 aaKnown RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 CDX4O14627 284 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 B4GALT2O60909 372 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 GCM2O75603 506 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 SSR2P43308 183 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 INPP1P49441 399 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 MVDP53602 400 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 LIM2P55344 173 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 SCRN3Q0VDG4 424 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 MAP4K2Q12851 820 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 SQSTM1Q13501 440 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 ZNF169Q14929 603 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 ZMYND11Q15326 602 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 PRTGQ2VWP7 1150 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 ZNF750Q32MQ0 723 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 DEFB134Q4QY38 66 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 SLC25A30Q5SVS4 291 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 C12orf73Q69YU5 71 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 ZC3H14Q6PJT7 736 aaKnown RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 MCATQ8IVS2 390 aaKnown RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 SUMF1Q8NBK3 374 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 TMEM52Q8NDY8 209 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 OR5T3Q8NGG3 340 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 OR52P1PQ8NH57 321 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 GOT1L1Q8NHS2 421 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 RIT1Q92963 219 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 GAL3ST3Q96A11 431 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 C10orf90Q96M02 699 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 TMEM121BQ9BXQ6 578 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 BHLHE41Q9C0J9 482 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 OR51J1Q9H342 316 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 MCCC2Q9HCC0 563 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 ENAMQ9NRM1 1142 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 ZNF275Q9NSD4 429 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 ATXN7L1Q9ULK2 861 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 NUBP2Q9Y5Y2 271 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 CCDC88CQ9P219 2028 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 SLC22A23A1A5C7 686 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 GTPBP1O00178 669 aaKnown RBP6.15□□□□□ -1.42
TMC1-201ENST00000297784 FOXS1O43638 330 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 HPGDSO60760 199 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 TBX19O60806 448 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 CFDP00746 253 aaPredicted RBP6.15□□□□□ -1.42
TMC1-201ENST00000297784 SLC35G6P0C7Q6 338 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 SULT1A3P0DMM9 295 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 SULT1A4P0DMN0 295 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 XCR1P46094 333 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 GCGRP47871 477 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 ZNF81P51508 661 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 CDH12P55289 794 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 STXBP1P61764 594 aaKnown RBP6.15□□□□□ -1.42
TMC1-201ENST00000297784 DHODHQ02127 395 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 ZNF91Q05481 1191 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 ILKQ13418 452 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 IL18Q14116 193 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 SLC9A5Q14940 896 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 MANEAQ5SRI9 462 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 ZNF770Q6IQ21 691 aaPredicted RBP6.15□□□□□ -1.42
TMC1-201ENST00000297784 RGS7BPQ6MZT1 257 aaPredicted RBP6.15□□□□□ -1.42
TMC1-201ENST00000297784 ARMC6Q6NXE6 501 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 TRIM40Q6P9F5 258 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 LRFN4Q6PJG9 635 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 CSNK1A1LQ8N752 337 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 OR9Q2Q8NGE9 314 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 SUN3Q8TAQ9 357 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 ZCCHC10Q8TBK6 192 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 TM9SF4Q92544 642 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 CNRIP1Q96F85 164 aaPredicted RBP6.15□□□□□ -1.42
TMC1-201ENST00000297784 PANX1Q96RD7 426 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 DPH2Q9BQC3 489 aaPredicted RBP6.15□□□□□ -1.42
TMC1-201ENST00000297784 COL25A1Q9BXS0 654 aaPredicted RBP6.15□□□□□ -1.42
TMC1-201ENST00000297784 TPT1P8Q9HAU6 139 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 ACER3Q9NUN7 267 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 EMC3Q9P0I2 261 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 BTNL2Q9UIR0 455 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 ZNF222Q9UK12 451 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 COPS3Q9UNS2 423 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 OTOGLQ3ZCN5 2332 aa6.15□□□□□ -1.42
TMC1-201ENST00000297784 CUL9Q8IWT3 2517 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 TRDV1A0A1B0GX56 115 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 PRR33A8MZF0 331 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 AIFM1O95831 613 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 FOLR1P15328 257 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 GABRA5P31644 462 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 BTCP35070 178 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 TRA2BP62995 288 aaKnown RBP6.15□□□□□ -1.43
TMC1-201ENST00000297784 CCL7P80098 99 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 TCF15Q12870 199 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 CEBPEQ15744 281 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 SNAPC1Q16533 368 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 PRAMEF17Q5VTA0 474 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 PRICKLE2Q7Z3G6 844 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 FGD2Q7Z6J4 655 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 LAPTM4BQ86VI4 370 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 EIF4E3Q8N5X7 224 aaKnown RBP6.15□□□□□ -1.43
TMC1-201ENST00000297784 CAMKVQ8NCB2 501 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 C11orf65Q8NCR3 313 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 CLRN3Q8NCR9 226 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 OR8D4Q8NGM9 314 aa6.15□□□□□ -1.43
TMC1-201ENST00000297784 SPPL2AQ8TCT8 520 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms