RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 HTR2BP41595 481 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR3A3P47888 321 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR3A2P47893 321 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TNFRSF17Q02223 184 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CRMP1Q14194 572 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ELOAQ14241 798 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 MSANTD1Q6ZTZ1 278 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CEP76Q8TAP6 659 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 GCDHQ92947 438 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 MROQ9BYG7 248 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ZNF576Q9H609 170 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 LDAHQ9H6V9 325 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 FBRSQ9HAH7 460 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SIAEQ9HAT2 523 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR6C2Q9NZP2 312 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ADAM18Q9Y3Q7 739 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CDH10Q9Y6N8 788 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TMEM72A0PK05 275 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 F5H5K5 113 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PRAMEF26H0Y7S4 382 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SEC14L2O76054 403 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 AKR1C4P17516 323 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PSMA3P25788 255 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 GIFP27352 417 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 LSM11P83369 360 aaKnown RBP eCLIP4.45□□□□□ -1.7
UBR1-201ENST00000290650 MAB21L1Q13394 359 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SMU1Q2TAY7 513 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CDNFQ49AH0 187 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ABHD17CQ6PCB6 329 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TECPR1Q7Z6L1 1165 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ZNF611Q8N823 705 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR5T2Q8NGG2 359 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 MS4A6EQ96DS6 147 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ELP4Q96EB1 424 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 NEURL3Q96EH8 262 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 NXF5Q9H1B4 397 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 PPIL3Q9H2H8 161 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 MGAT4CQ9UBM8 478 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 DHDHQ9UQ10 334 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 FAM221BA6H8Z2 402 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 C9J4A7 227 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 KLK8O60259 260 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR10A3P58181 314 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 REEP5Q00765 189 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OXA1LQ15070 435 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 BEX5Q5H9J7 111 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SPIN3Q5JUX0 258 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR7E24Q6IFN5 339 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 LINC00346Q8IVM7 164 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TMEM163Q8TC26 289 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SLC22A8Q8TCC7 542 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 DUSP19Q8WTR2 217 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SLC35A4Q96G79 324 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ZNF578Q96N58 590 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 ISG20L2Q9H9L3 353 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 SLC6A20Q9NP91 592 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 THAP10Q9P2Z0 257 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 PCDHGA3Q9Y5H0 932 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TEX13CA0A0J9YWL9 993 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TMEM221A6NGB7 291 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SLC22A31A6NKX4 558 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PRAMEF2O60811 474 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ARL6IP5O75915 188 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CXCL10P02778 98 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 UBL4AP11441 157 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 ZNF16P17020 682 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 DRD1P21728 446 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 UQCRC1P31930 480 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 AP3S2P59780 193 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 HNRNPKP61978 463 aaKnown RBP eCLIP4.45□□□□□ -1.7
UBR1-201ENST00000290650 SPOCK1Q08629 439 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SNTB2Q13425 540 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 PGGHGQ32M88 737 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 CDKL4Q5MAI5 379 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 EID2Q8N6I1 236 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 DNAAF1Q8NEP3 725 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 MRGPRX1Q96LB2 322 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 DEFB126Q9BYW3 111 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 OR52A5Q9H2C5 316 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 SERINC1Q9NRX5 453 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 TXNL4BQ9NX01 149 aaKnown RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 TMEM5Q9Y2B1 443 aa4.45□□□□□ -1.7
UBR1-201ENST00000290650 PCYT1BQ9Y5K3 369 aaPredicted RBP4.45□□□□□ -1.7
UBR1-201ENST00000290650 SCN8AQ9UQD0 1980 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 TRAV18A0A075B6X5 111 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CDHR4A6H8M9 788 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 GPANK1O95872 356 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ST6GAL1P15907 406 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CD6P30203 668 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 AGBL4Q5VU57 503 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PRAMEF8Q5VWM4 474 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PRAMEF7Q5VXH5 474 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 ZNF547Q8IVP9 402 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 RDH10Q8IZV5 341 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CDRT4Q8N9R6 151 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 OR5AK2Q8NH90 309 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 TANKQ92844 425 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 HRASLS5Q96KN8 279 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 FKBP14Q9NWM8 211 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms