RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MRPL2Q5T653 305 aaKnown RBP14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 OR5M10Q6IEU7 315 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 SLC7A13Q8TCU3 470 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 TMEM255BQ8WV15 326 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 DVL3Q92997 716 aaPredicted RBP14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 CXorf36Q9H7Y0 433 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 SERPINA5P05154 406 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 AKR1C2P52895 323 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 ZNF169Q14929 603 aaPredicted RBP14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 TCTE1Q5JU00 501 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 FAM83HQ6ZRV2 1179 aaPredicted RBP14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 ZNF765Q7L2R6 523 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 FRZBQ92765 325 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 KHSRPQ92945 711 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 DTD2Q96FN9 168 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 TXNDC15Q96J42 360 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 FYTTD1Q96QD9 318 aaKnown RBP14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 DEFB126Q9BYW3 111 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 PLEKHJ1Q9NW61 149 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 MBLAC1A4D2B0 266 aaPredicted RBP14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 E9PI62 339 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 AIFM1O95831 613 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 UBL4AP11441 157 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 EIF2DP41214 584 aaKnown RBP14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 CDK3Q00526 305 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 LRRC26Q2I0M4 334 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 SFXN4Q6P4A7 337 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 NDUFAF7Q7L592 441 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 DIO2Q92813 273 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 PDLIM5Q96HC4 596 aaKnown RBP14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 ZC3H12DA2A288 527 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 FBXO24O75426 580 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 MED6O75586 246 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 UBBP0CG47 229 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 UBCP0CG48 685 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 OR8G3PP0DMU2 310 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 P2RY2P41231 377 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 RPS27AP62979 156 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 UBA52P62987 128 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 VASNQ6EMK4 673 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 ZFP82Q8N141 532 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 RTP3Q9BQQ7 232 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 WASH6PQ9NQA3 447 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 DVL2O14641 736 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 CEBPBP17676 345 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 TNK1Q13470 666 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 RBM39Q14498 530 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 ZNF695Q8IW36 515 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 RBPMSQ93062 196 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 GOLGA4Q13439 2230 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 FAM230AA0A1W2PPH8 454 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 KDM4EB2RXH2 506 aaPredicted RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 POLR1CO15160 346 aaPredicted RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 SLC34A2O95436 690 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 PRAMEF8Q5VWM4 474 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 PRAMEF7Q5VXH5 474 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 KDM4DQ6B0I6 523 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 DLEU7Q6UYE1 221 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 RBM45Q8IUH3 476 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 LILRA3Q8N6C8 439 aaPredicted RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 ISL2Q96A47 359 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 OR51B6Q9H340 312 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 C1GALT1Q9NS00 363 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 CORINQ9Y5Q5 1042 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 CACNA1SQ13698 1873 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 NUDT21O43809 227 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 SIX6O95475 246 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 JUNBP17275 347 aaPredicted RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 PRLHRP49683 370 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 RAB33AQ14088 237 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 SYT6Q5T7P8 510 aaPredicted RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 ZNF852Q6ZMS4 543 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 TRAPPC6BQ86SZ2 158 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 ZSCAN4Q8NAM6 433 aaPredicted RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 FOXRED1Q96CU9 486 aaPredicted RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 OR5B2Q96R09 309 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 RBM24Q9BX46 236 aaKnown RBP14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 SLC2A4RGQ9NR83 387 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 PPT2Q9UMR5 302 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 SULT1C2O00338 296 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 C5AR1P21730 350 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 IRF4Q15306 451 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 CCSMST1Q4G0I0 132 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 OR7E24Q6IFN5 339 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 SBSNQ6UWP8 590 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 SGPP2Q8IWX5 399 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 ZNF416Q9BWM5 594 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 NT5DC2Q9H857 520 aa14.32□□□□□ -0.12
SHROOM4-201ENST00000289292 STMND1H3BQB6 276 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 GFRA2O00451 464 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 CTHP32929 405 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 RUNX3Q13761 415 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 COX15Q7KZN9 410 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 ZNF454Q8N9F8 522 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 OR4M1Q8NGD0 313 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 FCRL1Q96LA6 429 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 NUDT22Q9BRQ3 303 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 KCNJ16Q9NPI9 418 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 CBR1P16152 277 aa14.31□□□□□ -0.12
SHROOM4-201ENST00000289292 PPP3CBP16298 524 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms