RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 SLC6A19Q695T7 634 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 MKXQ8IYA7 352 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 RNF113BQ8IZP6 322 aaKnown RBP17.27■□□□□ 0.35
PCDH1-201ENST00000287008 SLC29A1Q99808 456 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 CPPED1Q9BRF8 314 aaPredicted RBP17.27■□□□□ 0.35
PCDH1-201ENST00000287008 SLAMF8Q9P0V8 285 aa17.27■□□□□ 0.35
PCDH1-201ENST00000287008 FAM183AA6NL82 134 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 NUDT21O43809 227 aaKnown RBP17.26■□□□□ 0.35
PCDH1-201ENST00000287008 CD1CP29017 333 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 UQCRC1P31930 480 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 PRSS3P35030 304 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 CCR2P41597 374 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 PFN3P60673 137 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 ZADH2Q8N4Q0 377 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 TMEM68Q96MH6 324 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 CACNG6Q9BXT2 260 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 GLIPR2Q9H4G4 154 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 KCNN3Q9UGI6 736 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 MAGED1Q9Y5V3 778 aaPredicted RBP17.26■□□□□ 0.35
PCDH1-201ENST00000287008 TPOP07202 933 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 OR5W2Q8NH69 310 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 ZNF431Q8TF32 576 aaPredicted RBP17.26■□□□□ 0.35
PCDH1-201ENST00000287008 TM4SF18Q96CE8 201 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 ZDHHC5Q9C0B5 715 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 THSD1Q9NS62 852 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 VSX1Q9NZR4 365 aaPredicted RBP17.26■□□□□ 0.35
PCDH1-201ENST00000287008 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.26■□□□□ 0.35
PCDH1-201ENST00000287008 TMEM269A0A1B0GVZ9 245 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 GPR171O14626 319 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 SUSD5O60279 629 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 CNOT4O95628 575 aaKnown RBP17.26■□□□□ 0.35
PCDH1-201ENST00000287008 T-ENOLP0DO92 83 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 EIF1P41567 113 aaKnown RBP17.26■□□□□ 0.35
PCDH1-201ENST00000287008 RAB12Q6IQ22 244 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 PAPD5Q8NDF8 572 aaKnown RBP17.26■□□□□ 0.35
PCDH1-201ENST00000287008 OR51T1Q8NGJ9 327 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 OR5D14Q8NGL3 314 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 AMDHD1Q96NU7 426 aa17.26■□□□□ 0.35
PCDH1-201ENST00000287008 DDX60Q8IY21 1712 aaKnown RBP17.26■□□□□ 0.35
PCDH1-201ENST00000287008 F10P00742 488 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 SLC35A1P78382 337 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 AIMP2Q13155 320 aaKnown RBP17.25■□□□□ 0.35
PCDH1-201ENST00000287008 SQSTM1Q13501 440 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 FNDC8Q8TC99 324 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 PATE1Q8WXA2 126 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 ANKRD60Q9BZ19 345 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 LTB4R2Q9NPC1 389 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 SSTR4P31391 388 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 YOD1Q5VVQ6 348 aaPredicted RBP17.25■□□□□ 0.35
PCDH1-201ENST00000287008 VASNQ6EMK4 673 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 CSNK2A3Q8NEV1 391 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 C14orf119Q9NWQ9 140 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 KLHL9Q9P2J3 617 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 MRPS2Q9Y399 296 aaKnown RBP17.25■□□□□ 0.35
PCDH1-201ENST00000287008 HSPB11Q9Y547 144 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 CORINQ9Y5Q5 1042 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 CACNA1CQ13936 2221 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 CABIN1Q9Y6J0 2220 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 UTS2O95399 124 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 AMY2AP04746 511 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 RPL34P49207 117 aaKnown RBP17.25■□□□□ 0.35
PCDH1-201ENST00000287008 TSPAN31Q12999 210 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 OR7G1Q8NGA0 311 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 IFI44Q8TCB0 444 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 UCN3Q969E3 161 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 VN1R3Q9BXE9 311 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 CNN3Q15417 329 aaKnown RBP17.25■□□□□ 0.35
PCDH1-201ENST00000287008 ELAVL1Q15717 326 aaKnown RBP17.25■□□□□ 0.35
PCDH1-201ENST00000287008 LSMEM2Q8N112 164 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 OR5J2Q8NH18 312 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 ZNF566Q969W8 418 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 SGCZQ96LD1 299 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 P2RY12Q9H244 342 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 CXorf36Q9H7Y0 433 aa17.25■□□□□ 0.35
PCDH1-201ENST00000287008 FAM230AA0A1W2PPH8 454 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 NCS1P62166 190 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 NTRK2Q16620 822 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 TECPR1Q7Z6L1 1165 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 COQ8AQ8NI60 647 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 QRSL1Q9H0R6 528 aaKnown RBP17.24■□□□□ 0.35
PCDH1-201ENST00000287008 AGPAT4Q9NRZ5 378 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 ZNF226Q9NYT6 803 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 NRAPQ86VF7 1730 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 MRPS14O60783 128 aaKnown RBP17.24■□□□□ 0.35
PCDH1-201ENST00000287008 MAOAP21397 527 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 GPR50Q13585 617 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 AK6Q9Y3D8 172 aaKnown RBP17.24■□□□□ 0.35
PCDH1-201ENST00000287008 SORBS2O94875 1100 aaKnown RBP17.24■□□□□ 0.35
PCDH1-201ENST00000287008 PSMB10P40306 273 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 OR7E24Q6IFN5 339 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 C6orf15Q6UXA7 325 aaPredicted RBP17.24■□□□□ 0.35
PCDH1-201ENST00000287008 PIGQQ9BRB3 760 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 NT5DC2Q9H857 520 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 TMEM9BQ9NQ34 198 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 MYH7BA7E2Y1 1941 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 EIF1BO60739 113 aaKnown RBP17.24■□□□□ 0.35
PCDH1-201ENST00000287008 IFNA5P01569 189 aa17.24■□□□□ 0.35
PCDH1-201ENST00000287008 PDE7AQ13946 482 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms