RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 POLR2J3Q9H1A7 115 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 DCLRE1BQ9H816 532 aa19.75■□□□□ 0.75
PDLIM3-203ENST00000284771 MPDZO75970 2070 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 GP1BBP13224 206 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 ANPEPP15144 967 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 SPIBQ01892 262 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 ST3GAL3Q11203 375 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 RIPK1Q13546 671 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 TOMM20Q15388 145 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 GRINAQ7Z429 371 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 YRDCQ86U90 279 aaKnown RBP19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 PQLC1Q8N2U9 271 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 DNAJA4Q8WW22 397 aaPredicted RBP19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 TMEM234Q8WY98 164 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 BARD1Q99728 777 aaKnown RBP19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 MRPS18CQ9Y3D5 142 aaKnown RBP19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 DNAJC13O75165 2243 aa19.74■□□□□ 0.75
PDLIM3-203ENST00000284771 TRBV4-1A0A0J9YWV2 114 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 A0A1W2PRQ8 180 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 CHP2O43745 196 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 TRAPPC6AO75865 159 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 GADD45GO95257 159 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 RASAL1O95294 804 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 BAG2O95816 211 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 LDLRP01130 860 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 HPNP05981 417 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 H1F0P07305 194 aaKnown RBP19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 HK1P19367 917 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 PTNP21246 168 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 B3GALT5-AS1P59052 145 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 DGCR6Q14129 220 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 LY6DQ14210 128 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 SEC23BQ15437 767 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 RPUSD3Q6P087 351 aaKnown RBP19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 POMZP3Q6PJE2 187 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 TBPL2Q6SJ96 375 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 OR4C15Q8NGM1 316 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 TMEM255BQ8WV15 326 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 PNPLA2Q96AD5 504 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 MRGPRX4Q96LA9 322 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 ZNF426Q9BUY5 554 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 SLC25A18Q9H1K4 315 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 STX18Q9P2W9 335 aaKnown RBP19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 RPS6KB2Q9UBS0 482 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 DKKL1Q9UK85 242 aa19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 MAGED1Q9Y5V3 778 aaPredicted RBP19.73■□□□□ 0.75
PDLIM3-203ENST00000284771 A0A087WUJ7 227 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 A0A087WZY1 265 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 ADAMDEC1O15204 470 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 DEAF1O75398 565 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 THRBP10828 461 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 FCGR1AP12314 374 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 MERTKQ12866 999 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 LAPTM4AQ15012 233 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 WIPI1Q5MNZ9 446 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 SLC22A16Q86VW1 577 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 RNF217Q8TC41 542 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 ZBTB8AQ96BR9 441 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 OR2B2Q9GZK3 357 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 ZDHHC11Q9H8X9 412 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 B4GALT7Q9UBV7 327 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 PRDM4Q9UKN5 801 aa19.72■□□□□ 0.75
PDLIM3-203ENST00000284771 ERVH48-1M5A8F1 160 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 GNGT2O14610 69 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 SWT1Q5T5J6 900 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 HS3ST5Q8IZT8 346 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 GTPBP8Q8N3Z3 284 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 FAM98AQ8NCA5 519 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 NR4A3Q92570 626 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 CENPNQ96H22 339 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 REEP1Q9H902 201 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 RNPEPL1Q9HAU8 725 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 SAMHD1Q9Y3Z3 626 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 IGKV1D-42A0A075B6H8 117 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 A0A087WUU8 490 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 OR2M5A3KFT3 312 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 C7orf72A4D263 438 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 TNFRSF11BO00300 401 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 ATP6V1G2O95670 118 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 CCNA2P20248 432 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 ADH6P28332 368 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 POLR2HP52434 150 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 EGR4Q05215 589 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 TRAM2Q15035 370 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 EXOC3L2Q2M3D2 409 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 PODNL1Q6PEZ8 512 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 P3H2Q8IVL5 708 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 FAM109AQ8N4B1 249 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 OR14L1PQ8NHC6 308 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 ALPK1Q96QP1 1244 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 BDH2Q9BUT1 245 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 DEFB127Q9H1M4 99 aa19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 TSPAN10Q9H1Z9 355 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-203ENST00000284771 TMED7-TICAM2A0A0A6YYA0 188 aa19.7■□□□□ 0.74
PDLIM3-203ENST00000284771 ZNF24P17028 368 aa19.7■□□□□ 0.74
PDLIM3-203ENST00000284771 APOBEC1P41238 236 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-203ENST00000284771 GFRA1P56159 465 aa19.7■□□□□ 0.74
PDLIM3-203ENST00000284771 GLYR1Q49A26 553 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-203ENST00000284771 CMPK2Q5EBM0 449 aa19.7■□□□□ 0.74
PDLIM3-203ENST00000284771 FGD3Q5JSP0 725 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms