RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 HEXAP06865 529 aa8.22□□□□□ -1.09
NIPBL-201ENST00000282516 ANXA7P20073 488 aaKnown RBP8.22□□□□□ -1.09
NIPBL-201ENST00000282516 ECI1P42126 302 aa8.22□□□□□ -1.09
NIPBL-201ENST00000282516 CRMP1Q14194 572 aa8.22□□□□□ -1.09
NIPBL-201ENST00000282516 PAGE3Q5JUK9 113 aa8.22□□□□□ -1.09
NIPBL-201ENST00000282516 DCAF12L1Q5VU92 463 aa8.22□□□□□ -1.09
NIPBL-201ENST00000282516 SLC5A8Q8N695 610 aa8.22□□□□□ -1.09
NIPBL-201ENST00000282516 GON7Q9BXV9 100 aa8.22□□□□□ -1.09
NIPBL-201ENST00000282516 COPS3Q9UNS2 423 aa8.22□□□□□ -1.09
NIPBL-201ENST00000282516 ZDHHC11BP0C7U3 371 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 DHRS4L1P0CG22 281 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 GLB1P16278 677 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 JUNDP17535 347 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 RPL11P62913 178 aaKnown RBP8.21□□□□□ -1.09
NIPBL-201ENST00000282516 FAM162BQ5T6X4 162 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 SHEQ5VZ18 495 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 DBF4BQ8NFT6 615 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 STT3BQ8TCJ2 826 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 FOXJ1Q92949 421 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 BPIFA2Q96DR5 249 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 MMP28Q9H239 520 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 MOB1AQ9H8S9 216 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 CNIH4Q9P003 139 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 A0A1W2PPH5 198 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 TNFRSF10AO00220 468 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 F7P08709 466 aaPredicted RBP8.21□□□□□ -1.09
NIPBL-201ENST00000282516 CDK4P11802 303 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 RABIFP47224 123 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 CLDN8P56748 225 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 SEC61A1P61619 476 aaKnown RBP8.21□□□□□ -1.09
NIPBL-201ENST00000282516 TATDN3Q17R31 274 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 TIGD3Q6B0B8 471 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 OR10K2Q6IF99 312 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 LPCAT3Q6P1A2 487 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 IRF2BP1Q8IU81 584 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 CDRT4Q8N9R6 151 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 ZMYND19Q96E35 227 aaPredicted RBP8.21□□□□□ -1.09
NIPBL-201ENST00000282516 ATG2BQ96BY7 2078 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 LRRC30A6NM36 301 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 H3BML4 177 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 WBP2NLQ6ICG8 309 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 KDM1BQ8NB78 822 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 CPNE4Q96A23 557 aaPredicted RBP8.21□□□□□ -1.09
NIPBL-201ENST00000282516 INIPQ9NRY2 104 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 THSD1Q9NS62 852 aa8.21□□□□□ -1.09
NIPBL-201ENST00000282516 EIF3FO00303 357 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 MT-ND4LP03901 98 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 BMP2P12643 396 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 SSTR4P31391 388 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 STK11Q15831 433 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 CDHR3Q6ZTQ4 885 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 SUMF1Q8NBK3 374 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 CHAC2Q8WUX2 184 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 EGLN3Q9H6Z9 239 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 NPAP1Q9NZP6 1156 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 ENPP4Q9Y6X5 453 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 FEZF1A0PJY2 475 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 VNN1O95497 513 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 FGF3P11487 239 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 OMGP23515 440 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 CNR2P34972 360 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 ADIRFQ15847 76 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 NLGN4XQ8N0W4 816 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 SLC35G3Q8N808 338 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 PEX11GQ96HA9 241 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 RANBP9Q96S59 729 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 KCNK12Q9HB15 430 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 ARFGEF2Q9Y6D5 1785 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 MITFO75030 526 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 TRHRP34981 398 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 GSCP56915 257 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 SQSTM1Q13501 440 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 CAMK2BQ13554 666 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 EBPQ15125 230 aaKnown RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 MUCL1Q96DR8 90 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 KLRG1Q96E93 195 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 DPH1Q9BZG8 443 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 GKN1Q9NS71 199 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF586Q9NXT0 402 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 CEPT1Q9Y6K0 416 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 SLC31A2O15432 143 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 RNGTTO60942 597 aaKnown RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 RGS11O94810 467 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 DDAH2O95865 285 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 KEAP1Q14145 624 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 ADAMTS14Q8WXS8 1223 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM19Q96HH6 336 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 SH3BGRL2Q9UJC5 107 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 MED16Q9Y2X0 877 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 TRIOBPQ9H2D6 2365 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 SALL3Q9BXA9 1300 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 C3P01024 1663 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 ENSAO43768 121 aaKnown RBP8.21□□□□□ -1.1
NIPBL-201ENST00000282516 THBS1P07996 1170 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 ACPPP15309 386 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 MAKP20794 623 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 GABRA2P47869 451 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 MSS51Q4VC12 460 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 TP53I3Q53FA7 332 aa8.21□□□□□ -1.1
NIPBL-201ENST00000282516 CMPK2Q5EBM0 449 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms