RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 G3V3Q6 166 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 M0R3H8 397 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 LRRTM2O43300 516 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 PLPP2O43688 288 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SC5DO75845 299 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 PIAS2O75928 621 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 TSPAN9O75954 239 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 GBAP04062 536 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 IFNA16P05015 189 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 CHRM5P08912 532 aaPredicted RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SAGP10523 405 aaPredicted RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 CEACAM1P13688 526 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 DRD2P14416 443 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 TYRP1P17643 537 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 GRK6P43250 576 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 CTSCP53634 463 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 KIAA1024LP59773 190 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 RPS7P62081 194 aaKnown RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 CTAG1AP78358 180 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 DPTQ07507 201 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 RPA4Q13156 261 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 NHLRC3Q5JS37 347 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ELFN2Q5R3F8 820 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 FAM69AQ5T7M9 428 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 KHDRBS2Q5VWX1 349 aaKnown RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SFXN4Q6P4A7 337 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF765Q7L2R6 523 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SLITRK4Q8IW52 837 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SLC25A45Q8N413 288 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SPICQ8N5J4 248 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 OR6T1Q8NGN1 323 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 DIO2Q92813 273 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SCAMP4Q969E2 229 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 LINC00615Q96LM1 132 aaPredicted RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 FAIM2Q9BWQ8 316 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 LGR4Q9BXB1 951 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 CACNG6Q9BXT2 260 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 MS4A8Q9BY19 250 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 OR51I1Q9H343 314 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 TCEAL2Q9H3H9 227 aaPredicted RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 EGLN3Q9H6Z9 239 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 WDR26Q9H7D7 661 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 NANSQ9NR45 359 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 PTGFRNQ9P2B2 879 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 POMT2Q9UKY4 750 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 CAMK2AQ9UQM7 478 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 NCOR2Q9Y618 2525 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ARID1BQ8NFD5 2236 aaPredicted RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 LRP4O75096 1905 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 TDRD6O60522 2096 aaKnown RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 A0A1W2PPL8 197 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 NAP1L6A6NFF2 107 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 MFSD2BA6NFX1 497 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 CD8B2A6NJW9 211 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 KRBOX1C9JBD0 128 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 PLPP1O14494 284 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 EEF1E1O43324 174 aaKnown RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 NDUFA2O43678 99 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 CD1AP06126 327 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 CD8BP10966 210 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ERGP11308 486 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 PREPP48147 710 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 RPS26P62854 115 aaKnown RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ST3GAL3Q11203 375 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SYPL1Q16563 259 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ALG11Q2TAA5 492 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SPDYE7PQ495Y7 208 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 PLEKHM3Q6ZWE6 761 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 TOMM5Q8N4H5 51 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 EID2Q8N6I1 236 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ACBD7Q8N6N7 88 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ZFP41Q8N8Y5 198 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SRFBP1Q8NEF9 429 aaKnown RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 OR4Q3Q8NH05 313 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 RHBDD1Q8TEB9 315 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 RAB8BQ92930 207 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ABHD1Q96SE0 405 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 UTP23Q9BRU9 249 aaKnown RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 RIOK2Q9BVS4 552 aaKnown RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF436Q9C0F3 470 aaPredicted RBP9.56□□□□□ -0.88
UPF3B-201ENST00000276201 SHARPINQ9H0F6 387 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 RERGLQ9H628 205 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF224Q9NZL3 707 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 KCMF1Q9P0J7 381 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 FAM8A1Q9UBU6 413 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 FBXL3Q9UKT7 428 aa9.56□□□□□ -0.88
UPF3B-201ENST00000276201 C17orf113A0A1B0GUU1 675 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 C2orf92A0A1B0GVN3 265 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 OR2AG2A6NM03 316 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 FZD7O75084 574 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 MTX2O75431 263 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 MTRF1O75570 445 aaKnown RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 SERPINI2O75830 405 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TBX6O95947 436 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 HOXC4P09017 264 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 NR2F1P10589 423 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 CXCL3P19876 107 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TEAD1P28347 426 aa9.55□□□□□ -0.88
UPF3B-201ENST00000276201 HNRNPKP61978 463 aaKnown RBP eCLIP9.55□□□□□ -0.88
UPF3B-201ENST00000276201 TMEM115Q12893 351 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms