RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ZNF311Q5JNZ3 666 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 PABPC1L2AQ5JQF8 200 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 SLCO4C1Q6ZQN7 724 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 MORN4Q8NDC4 146 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 OR5M9Q8NGP3 310 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 PIGXQ8TBF5 258 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 SMPDL3AQ92484 453 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 SLC35G5Q96KT7 338 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 MS4A4EQ96PG1 132 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 NDC1Q9BTX1 674 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 PRKAG2Q9UGJ0 569 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 HELZP42694 1942 aaKnown RBP11.9□□□□□ -0.5
HERC6-202ENST00000273960 S100A6P06703 90 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 TMIGD3P0DMS9 266 aaPredicted RBP11.9□□□□□ -0.5
HERC6-202ENST00000273960 VSIG10L2P0DP72 767 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 ARFIP1P53367 373 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 TGIF1Q15583 401 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 ZNF783Q6ZMS7 281 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 SSX6Q7RTT6 188 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 SLC9B2Q86UD5 537 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 TBC1D19Q8N5T2 526 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 OR1S2Q8NGQ3 325 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 PAQR8Q8TEZ7 354 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 COL26A1Q96A83 441 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 ZNF285Q96NJ3 590 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 WDR77Q9BQA1 342 aaPredicted RBP11.9□□□□□ -0.5
HERC6-202ENST00000273960 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 GPN1Q9HCN4 374 aaPredicted RBP11.9□□□□□ -0.5
HERC6-202ENST00000273960 ASB6Q9NWX5 421 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 NDOR1Q9UHB4 597 aa11.9□□□□□ -0.5
HERC6-202ENST00000273960 ASCC3Q8N3C0 2202 aaKnown RBP11.9□□□□□ -0.5
HERC6-202ENST00000273960 A0A0G2JK05 382 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 FAM171A2A8MVW0 826 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 F5H5P2 479 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 GFYI3L273 518 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 SURF4O15260 269 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 IGLV3-27P01718 113 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 HIST1H2ABP04908 130 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 CHRM4P08173 479 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 SERPINA4P29622 427 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 ART1P52961 327 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 RGS8P57771 180 aaPredicted RBP11.9□□□□□ -0.51
HERC6-202ENST00000273960 SRSF3P84103 164 aaKnown RBP11.9□□□□□ -0.51
HERC6-202ENST00000273960 TCEA2Q15560 299 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 TMEM69Q5SWH9 247 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 PRPF38BQ5VTL8 546 aaKnown RBP11.9□□□□□ -0.51
HERC6-202ENST00000273960 AADACL4Q5VUY2 407 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 C1orf94Q6P1W5 598 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 SLC39A5Q6ZMH5 540 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 HIST3H2AQ7L7L0 130 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 ZNF546Q86UE3 836 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 CCDC36Q8IYA8 594 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 HIST1H2ACQ93077 130 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 ZMYND19Q96E35 227 aaPredicted RBP11.9□□□□□ -0.51
HERC6-202ENST00000273960 ELP4Q96EB1 424 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 PDCD10Q9BUL8 212 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 JAM3Q9BX67 310 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 GSN-AS1Q9NRJ2 163 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 DOCK6Q96HP0 2047 aa11.9□□□□□ -0.51
HERC6-202ENST00000273960 A0A1W2PRQ8 180 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 IRGMA1A4Y4 181 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 IDSB3KWA1 339 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 RPP14O95059 124 aaKnown RBP11.89□□□□□ -0.51
HERC6-202ENST00000273960 HMGA1P17096 107 aaKnown RBP11.89□□□□□ -0.51
HERC6-202ENST00000273960 MMP15P51511 669 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 NTHL1P78549 312 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 FZD5Q13467 585 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 OR7A5Q15622 319 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 STPG1Q5TH74 334 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 TMEM71Q6P5X7 295 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 HSD17B13Q7Z5P4 300 aaPredicted RBP11.89□□□□□ -0.51
HERC6-202ENST00000273960 CCDC116Q8IYX3 515 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 OR14A16Q8NHC5 309 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 RIOK2Q9BVS4 552 aaKnown RBP11.89□□□□□ -0.51
HERC6-202ENST00000273960 PBX4Q9BYU1 374 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 WDR13Q9H1Z4 485 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 SLC22A7Q9Y694 548 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 TRBV5-4A0A0C4DH59 114 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 ARRDC5A6NEK1 342 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 KRT33AO76009 404 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 EPPINO95925 133 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 SOD2P04179 222 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 FBXO45P0C2W1 286 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 EPXP11678 715 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 PTGFRP43088 359 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 RING1Q06587 406 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 PDZK1IP1Q13113 114 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 PGGHGQ32M88 737 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 TMEM220Q6QAJ8 160 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 GLDNQ6ZMI3 551 aaPredicted RBP11.89□□□□□ -0.51
HERC6-202ENST00000273960 TRAPPC5Q8IUR0 188 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 POGLUT1Q8NBL1 392 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 RSRP1Q9BUV0 290 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 P2RX2Q9UBL9 471 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 MIOXQ9UGB7 285 aa11.89□□□□□ -0.51
HERC6-202ENST00000273960 HPP00738 406 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 MT-ND5P03915 603 aa11.88□□□□□ -0.51
HERC6-202ENST00000273960 GIPP09681 153 aaPredicted RBP11.88□□□□□ -0.51
HERC6-202ENST00000273960 MAT2AP31153 395 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms