RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TUBA3EQ6PEY2 450 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 APCDD1LQ8NCL9 501 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 SLC41A3Q96GZ6 507 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 DEFB126Q9BYW3 111 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 NXF5Q9H1B4 397 aaKnown RBP22.45■■□□□ 1.19
SSBP4-201ENST00000270061 ANKRD10Q9NXR5 420 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 MRTO4Q9UKD2 239 aaKnown RBP22.45■■□□□ 1.19
SSBP4-201ENST00000270061 A0A087WUU8 490 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 A0A087WXM4 84 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 C2orf92A0A1B0GVN3 265 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 ANKUB1A6NFN9 424 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 TO15178 435 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 OSMP13725 252 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 IFNGR2P38484 337 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 HLCSP50747 726 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 IL5RAQ01344 420 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 FOXD4Q12950 439 aaPredicted RBP22.45■■□□□ 1.18
SSBP4-201ENST00000270061 NNATQ16517 81 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 LAIR2Q6ISS4 152 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 GDF7Q7Z4P5 450 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 C17orf47Q8NEP4 570 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 PRR7Q8TB68 274 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF566Q969W8 418 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 REV1Q9UBZ9 1251 aa22.45■■□□□ 1.18
SSBP4-201ENST00000270061 PPIEQ9UNP9 301 aaKnown RBP22.45■■□□□ 1.18
SSBP4-201ENST00000270061 THY1P04216 161 aa22.44■■□□□ 1.18
SSBP4-201ENST00000270061 CRISP1P54107 249 aa22.44■■□□□ 1.18
SSBP4-201ENST00000270061 CXCR4P61073 352 aa22.44■■□□□ 1.18
SSBP4-201ENST00000270061 PSPHP78330 225 aa22.44■■□□□ 1.18
SSBP4-201ENST00000270061 ZER1Q7Z7L7 766 aa22.44■■□□□ 1.18
SSBP4-201ENST00000270061 CCDC71Q8IV32 467 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-201ENST00000270061 C9orf40Q8IXQ3 194 aa22.44■■□□□ 1.18
SSBP4-201ENST00000270061 ACOT11Q8WXI4 607 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-201ENST00000270061 VMP1Q96GC9 406 aa22.44■■□□□ 1.18
SSBP4-201ENST00000270061 DIDO1Q9BTC0 2240 aaKnown RBP22.44■■□□□ 1.18
SSBP4-201ENST00000270061 TRBV11-1A0A0K0K1C0 115 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 TRAPPC13A5PLN9 417 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 PRG2P13727 222 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 ATP6V1B1P15313 513 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 CRHBPP24387 322 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 CD96P40200 585 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 ST13P50502 369 aaKnown RBP22.43■■□□□ 1.18
SSBP4-201ENST00000270061 NR1H2P55055 460 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 ALDH6A1Q02252 535 aaKnown RBP22.43■■□□□ 1.18
SSBP4-201ENST00000270061 OC90Q02509 493 aaPredicted RBP22.43■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF766Q5HY98 468 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 SLC29A4Q7RTT9 530 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 ST6GALNAC3Q8NDV1 305 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 CNOT9Q92600 299 aaKnown RBP22.43■■□□□ 1.18
SSBP4-201ENST00000270061 TAAR6Q96RI8 345 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF559Q9BR84 538 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 DNAJB12Q9NXW2 375 aaKnown RBP22.43■■□□□ 1.18
SSBP4-201ENST00000270061 CDK2AP1O14519 115 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 CCDC159P0C7I6 412 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 GKN3PP0CG01 181 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 HTR2AP28223 471 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 ADH7P40394 386 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 MAD2L1BPQ15013 274 aaPredicted RBP22.43■■□□□ 1.18
SSBP4-201ENST00000270061 OR1Q1Q15612 314 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 OR1C1Q15619 314 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 HLA-DQA1Q5Y7H0 255 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF441Q8N8Z8 693 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 SIGLEC12Q96PQ1 595 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 WWTR1Q9GZV5 400 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 UBQLN4Q9NRR5 601 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 BLOC1S6Q9UL45 172 aa22.43■■□□□ 1.18
SSBP4-201ENST00000270061 UTP20O75691 2785 aaKnown RBP22.42■■□□□ 1.18
SSBP4-201ENST00000270061 ZAR1LA6NP61 321 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 BCAS1O75363 584 aaPredicted RBP22.42■■□□□ 1.18
SSBP4-201ENST00000270061 EDN3P14138 238 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 GSTM3P21266 225 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 CHMP24386 653 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 MLF1P58340 268 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 PTGES3Q15185 160 aaKnown RBP22.42■■□□□ 1.18
SSBP4-201ENST00000270061 KLHL26Q53HC5 615 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 SPINK14Q6IE38 97 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF613Q6PF04 617 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF550Q7Z398 422 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 MDS2Q8NDY4 140 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 OR4C3Q8NH37 302 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 HSPBAP1Q96EW2 488 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 PCDHGB6Q9Y5F9 930 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 ICE1Q9Y2F5 2266 aa22.42■■□□□ 1.18
SSBP4-201ENST00000270061 SERINC4A6NH21 518 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 AGFG2O95081 481 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 CDH15P55291 814 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 GABARAPL2P60520 117 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF730Q6ZMV8 503 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 Q6ZPB1 254 aaPredicted RBP22.41■■□□□ 1.18
SSBP4-201ENST00000270061 NKAIN4Q8IVV8 208 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 DEPDC4Q8N2C3 294 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF614Q8N883 585 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 ZNF527Q8NB42 609 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 GNPDA2Q8TDQ7 276 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 THAP3Q8WTV1 239 aaPredicted RBP22.41■■□□□ 1.18
SSBP4-201ENST00000270061 SLX1AQ9BQ83 275 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 FAM192AQ9GZU8 254 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 LRFN1Q9P244 771 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 SLC35A3Q9Y2D2 325 aa22.41■■□□□ 1.18
SSBP4-201ENST00000270061 LYPD3O95274 346 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms