RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PMEPA1Q969W9 287 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 TMIGD2Q96BF3 282 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 C3orf49Q96BT1 292 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 BPIFA2Q96DR5 249 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 SLC38A2Q96QD8 506 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 TAAR9Q96RI9 348 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 COPS4Q9BT78 406 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 PLA2G12AQ9BZM1 189 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 EGLN3Q9H6Z9 239 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 RSL24D1Q9UHA3 163 aaKnown RBP14.05□□□□□ -0.16
COPS3-201ENST00000268717 PCDHGA3Q9Y5H0 932 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 GTPBP1O00178 669 aaKnown RBP14.04□□□□□ -0.16
COPS3-201ENST00000268717 CDC42EP2O14613 210 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 FADS1O60427 444 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 KLF7O75840 302 aaPredicted RBP14.04□□□□□ -0.16
COPS3-201ENST00000268717 ZFAND5O76080 213 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 RCBTB2O95199 551 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 CDK1P06493 297 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 IFI30P13284 250 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 EMX1Q04741 257 aaPredicted RBP14.04□□□□□ -0.16
COPS3-201ENST00000268717 NEDD8Q15843 81 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 CNPY1Q3B7I2 92 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 NUP54Q7Z3B4 507 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 SPACA3Q8IXA5 215 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 AMER2Q8N7J2 671 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 OR8D4Q8NGM9 314 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 PFN4Q8NHR9 129 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 RNF138Q8WVD3 245 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 KCNE4Q8WWG9 221 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 GGHQ92820 318 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 MESP1Q9BRJ9 268 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 FAM117AQ9C073 453 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 ZNF700Q9H0M5 742 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 DSN1Q9H410 356 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 MEPEQ9NQ76 525 aaPredicted RBP14.04□□□□□ -0.16
COPS3-201ENST00000268717 TBC1D23Q9NUY8 699 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 TVP23BQ9NYZ1 205 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 ERVK-18Q9QC07 812 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 ICAM5Q9UMF0 924 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 NPFFR2Q9Y5X5 522 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 TRBV11-1A0A0K0K1C0 115 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 SNTNA6NMZ2 147 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 NTN1O95631 604 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 DLGAP3O95886 979 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 MT-ND2P03891 347 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 HMGN1P05114 100 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 UMODP07911 640 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 RAB40ALP0C0E4 278 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 MAKP20794 623 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 DCKP27707 260 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 EVI2BP34910 448 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 TMED10P49755 219 aaKnown RBP14.04□□□□□ -0.16
COPS3-201ENST00000268717 SH3BGRP55822 239 aaPredicted RBP14.04□□□□□ -0.16
COPS3-201ENST00000268717 TLE3Q04726 772 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 PCOLCEQ15113 449 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 TBCEQ15813 527 aaPredicted RBP14.04□□□□□ -0.16
COPS3-201ENST00000268717 EXT1Q16394 746 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 COL28A1Q2UY09 1125 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 PGGHGQ32M88 737 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 ACSM5Q6NUN0 579 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 AHSA2Q719I0 299 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 PRR22Q8IZ63 422 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 CADM2Q8N3J6 435 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 OR2T33Q8NG76 320 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 C9orf43Q8TAL5 461 aaPredicted RBP14.04□□□□□ -0.16
COPS3-201ENST00000268717 TMEM163Q8TC26 289 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 FAR1Q8WVX9 515 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 TTC9Q92623 222 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 DOK1Q99704 481 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 TMEM43Q9BTV4 400 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 TSSK6Q9BXA6 273 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 TBL1XR1Q9BZK7 514 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 B3GNT4Q9C0J1 378 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 CCDC90BQ9GZT6 254 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 RPL36Q9Y3U8 105 aaKnown RBP14.04□□□□□ -0.16
COPS3-201ENST00000268717 B3GALT1Q9Y5Z6 326 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 COMMD3-BMI1R4GMX3 469 aa14.04□□□□□ -0.16
COPS3-201ENST00000268717 CDC14CA4D256 554 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 C9orf172C9J069 976 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 H3BSA7 217 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 NDUFB5O43674 189 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 HCN1O60741 890 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 ENTPD6O75354 484 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 STK17BO94768 372 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 NADKO95544 446 aaPredicted RBP14.03□□□□□ -0.16
COPS3-201ENST00000268717 SLC1A3P43003 542 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 SLC9A3P48764 834 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 SNAPC1Q16533 368 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 RNLSQ5VYX0 342 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 ATG4DQ86TL0 474 aaPredicted RBP14.03□□□□□ -0.16
COPS3-201ENST00000268717 CYP4Z2PQ8N1L4 340 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 SLC15A4Q8N697 577 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 IQCF1Q8N6M8 205 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 TCEANCQ8N8B7 351 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 GALNT6Q8NCL4 622 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 OR52L1Q8NGH7 329 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 RNF217Q8TC41 542 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 FANK1Q8TC84 345 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 ELP5Q8TE02 316 aa14.03□□□□□ -0.16
COPS3-201ENST00000268717 RORBQ92753 470 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms