RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 NRP1O14786 923 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 LILRB3O75022 631 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 CD1DP15813 335 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 CBR1P16152 277 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 RPS18P62269 152 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ELAVL3Q14576 367 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ENTHD1Q8IYW4 607 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 OR4K13Q8NH42 304 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 SAT2Q96F10 170 aaPredicted RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 FGFBP2Q9BYJ0 223 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ENPP4Q9Y6X5 453 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 AKAP6Q13023 2319 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 DCDC2BA2VCK2 349 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 RAB5AP20339 215 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ACVRL1P37023 503 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 BAMBIQ13145 260 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 CDK5R2Q13319 367 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 SLC22A6Q4U2R8 563 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 TMEM244Q5VVB8 128 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 TMEM71Q6P5X7 295 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 RBMXL3Q8N7X1 1067 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 PSMF1Q92530 271 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 KLRG1Q96E93 195 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 YIPF1Q9Y548 306 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 TNFRSF10AO00220 468 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 PLCXD3Q63HM9 321 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 MRPL10Q7Z7H8 261 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 GLB1L2Q8IW92 636 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 INTS12Q96CB8 462 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 L3HYPDHQ96EM0 354 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 HHIPL1Q96JK4 782 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 GINS3Q9BRX5 216 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 NKX6-2Q9C056 277 aaPredicted RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ZCCHC4Q9H5U6 513 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ACKR4Q9NPB9 350 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 MYEF2Q9P2K5 600 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 KCNK6Q9Y257 313 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 PPP1R3DO95685 299 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 TBX18O95935 607 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 CTRB1P17538 263 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 DUSP6Q16828 381 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 CTRB2Q6GPI1 263 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ENPP6Q6UWR7 440 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 OR1M1Q8NGA1 313 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 CMTM2Q8TAZ6 248 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ZNF331Q9NQX6 463 aaPredicted RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 BABAM2Q9NXR7 383 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 GAR1Q9NY12 217 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 CNOT2Q9NZN8 540 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 GPR34Q9UPC5 381 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 GAB2Q9UQC2 676 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 PCDHAC2Q9Y5I4 1007 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 MYO5AQ9Y4I1 1855 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 PFKMP08237 780 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 SELENOWP63302 87 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 LBX2Q6XYB7 198 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 TPPP3Q9BW30 176 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 PIGMQ9H3S5 423 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 LIN7CQ9NUP9 197 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 RHBDD3Q9Y3P4 386 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 A6NCN8 305 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 THBS1P07996 1170 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 RPL17P18621 184 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 SERPINA11Q86U17 422 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 MCATQ8IVS2 390 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 SLC35F3Q8IY50 421 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 KCNRGQ8N5I3 272 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ADAMTS14Q8WXS8 1223 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 ENKD1Q9H0I2 346 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 WIF1Q9Y5W5 379 aa11.39□□□□□ -0.59
SRRM4-201ENST00000267260 TDRD15B5MCY1 1934 aaKnown RBP11.39□□□□□ -0.59
SRRM4-201ENST00000267260 MYOCOSA0A1B0GUC4 107 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 B4GAT1O43505 415 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 CD79AP11912 226 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 FECHP22830 423 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 GABRR1P24046 479 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 ADIRFQ15847 76 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 BEX5Q5H9J7 111 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 M1APQ8TC57 530 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 MRPL38Q96DV4 380 aaKnown RBP11.38□□□□□ -0.59
SRRM4-201ENST00000267260 WDR92Q96MX6 357 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 METTL17Q9H7H0 456 aaPredicted RBP11.38□□□□□ -0.59
SRRM4-201ENST00000267260 MCTS1Q9ULC4 181 aaKnown RBP11.38□□□□□ -0.59
SRRM4-201ENST00000267260 SMPD1P17405 629 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 PAX6P26367 422 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 CXCR4P61073 352 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 DIO2Q92813 273 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 OR5B2Q96R09 309 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 SLC35D1Q9NTN3 355 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 EHFQ9NZC4 300 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 GOLT1BQ9Y3E0 138 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 UNC13CQ8NB66 2214 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 HOXA1P49639 335 aaPredicted RBP11.38□□□□□ -0.59
SRRM4-201ENST00000267260 EBPQ15125 230 aaKnown RBP11.38□□□□□ -0.59
SRRM4-201ENST00000267260 CDONQ4KMG0 1287 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 PARP16Q8N5Y8 322 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 OR4N2Q8NGD1 307 aa11.38□□□□□ -0.59
SRRM4-201ENST00000267260 SIDT1Q9NXL6 827 aaKnown RBP11.38□□□□□ -0.59
SRRM4-201ENST00000267260 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms