RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 PEPDP12955 493 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 COL9A1P20849 921 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 GDI1P31150 447 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 EVI2BP34910 448 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 NRG3P56975 720 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 OR12D2P58182 307 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 CLPPQ16740 277 aaPredicted RBP11.48□□□□□ -0.57
BEST3-201ENST00000266661 SLC25A35Q3KQZ1 300 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 ITPRIPL2Q3MIP1 535 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 CEP78Q5JTW2 689 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 NUDT18Q6ZVK8 323 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 CEACAM19Q7Z692 300 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 TMEFF1Q8IYR6 380 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 GHDCQ8N2G8 530 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 SLC43A2Q8N370 569 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 CAMKVQ8NCB2 501 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 SMPDL3BQ92485 455 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 CNOT9Q92600 299 aaKnown RBP11.48□□□□□ -0.57
BEST3-201ENST00000266661 RFT1Q96AA3 541 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 ANKRD9Q96BM1 317 aaPredicted RBP11.48□□□□□ -0.57
BEST3-201ENST00000266661 C4orf36Q96KX1 117 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 ZNF559Q9BR84 538 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 IFT27Q9BW83 186 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 GHITMQ9H3K2 345 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 MCCC2Q9HCC0 563 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 RPRD1BQ9NQG5 326 aaKnown RBP11.48□□□□□ -0.57
BEST3-201ENST00000266661 C14orf105Q9NVL8 296 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 EVA1BQ9NVM1 165 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 ACTR10Q9NZ32 417 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 NPFFR2Q9Y5X5 522 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 MYO15AQ9UKN7 3530 aa11.48□□□□□ -0.57
BEST3-201ENST00000266661 TRAV27A0A087WT01 109 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 TBC1D3DA0A087WVF3 549 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 TBC1D3IA0A087WXS9 549 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 SLC9B1P1A6NJY1 282 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 TBC1D3LB9A6J9 549 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 H0YGG7 62 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 AKR7A2O43488 359 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 CHP2O43745 196 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 LDB3O75112 727 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 CBX7O95931 251 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 TBC1D3HP0C7X1 549 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 S1PR1P21453 382 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 CAPZA2P47755 286 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 SEC13P55735 322 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 ARF3P61204 181 aaPredicted RBP11.47□□□□□ -0.57
BEST3-201ENST00000266661 MAB21L1Q13394 359 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 KLHL12Q53G59 568 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 ZNF57Q68EA5 555 aaPredicted RBP11.47□□□□□ -0.57
BEST3-201ENST00000266661 FAAH2Q6GMR7 532 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 TBC1D3CQ6IPX1 549 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 PYHIN1Q6K0P9 492 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 FIGNL1Q6PIW4 674 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 ENPP7Q6UWV6 458 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 ABHD13Q7L211 337 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 BMP8AQ7Z5Y6 402 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 TBC1D3Q8IZP1 549 aaPredicted RBP11.47□□□□□ -0.57
BEST3-201ENST00000266661 SAMD12Q8N8I0 201 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 COX18Q8N8Q8 333 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 OR5J2Q8NH18 312 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 DEDD2Q8WXF8 326 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 AKAP1Q92667 903 aaKnown RBP eCLIP11.47□□□□□ -0.57
BEST3-201ENST00000266661 ELSPBP1Q96BH3 223 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 TNFRSF13CQ96RJ3 184 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 OR51V1Q9H2C8 321 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 ING3Q9NXR8 418 aa11.47□□□□□ -0.57
BEST3-201ENST00000266661 A0A0A6YYJ9 748 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 A0A1B0GWA3 101 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 ZNF860A6NHJ4 632 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 LRRC72A6NJI9 287 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 FOXS1O43638 330 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 PPP1R3DO95685 299 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 APBB3O95704 486 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 TFP02787 698 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 CD1AP06126 327 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 MRPL3P09001 348 aaKnown RBP11.46□□□□□ -0.57
BEST3-201ENST00000266661 NTSR1P30989 418 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 ACSL1P33121 698 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 GABRA3P34903 492 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 RBM34P42696 430 aaKnown RBP11.46□□□□□ -0.57
BEST3-201ENST00000266661 RAB25P57735 213 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 RPS11P62280 158 aaKnown RBP eCLIP11.46□□□□□ -0.57
BEST3-201ENST00000266661 POU6F2P78424 691 aaPredicted RBP11.46□□□□□ -0.57
BEST3-201ENST00000266661 GPLD1P80108 840 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 C19orf57Q0VDD7 668 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 GGTLC2Q14390 218 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 EXOSC7Q15024 291 aaKnown RBP11.46□□□□□ -0.57
BEST3-201ENST00000266661 ACSM3Q53FZ2 586 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 FCRLBQ6BAA4 426 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 RPTNQ6XPR3 784 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 DGAT2L6Q6ZPD8 337 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 RNF44Q7L0R7 432 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 YAF2Q8IY57 180 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 CDK20Q8IZL9 346 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 CA13Q8N1Q1 262 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 ARHGEF39Q8N4T4 335 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 OR5T3Q8NGG3 340 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 OR5H6Q8NGV6 325 aa11.46□□□□□ -0.57
BEST3-201ENST00000266661 TRMT10AQ8TBZ6 339 aaKnown RBP11.46□□□□□ -0.57
BEST3-201ENST00000266661 SMAP2Q8WU79 429 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms