RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 OR10G6Q8NH81 332 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 MOSPD2Q8NHP6 518 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 FAM174AQ8TBP5 190 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 SMPDL3BQ92485 455 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 DVL3Q92997 716 aaPredicted RBP12.02□□□□□ -0.48
SNX1-201ENST00000261889 SCMH1Q96GD3 660 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 C20orf85Q9H1P6 137 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 MCCC2Q9HCC0 563 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 B3GNT2Q9NY97 397 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 FRYQ5TBA9 3013 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 H7C1C5 153 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 SELENOFO60613 162 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 KHDRBS3O75525 346 aaKnown RBP12.02□□□□□ -0.49
SNX1-201ENST00000261889 SPDEFO95238 335 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 PAPLNO95428 1278 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 HLA-DQB1P01920 261 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 ACSM4P0C7M7 580 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 HIST1H1TP22492 207 aaPredicted RBP12.02□□□□□ -0.49
SNX1-201ENST00000261889 LCN6P62502 163 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 DHCR24Q15392 516 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 BICRALQ6AI39 1079 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 ZNF782Q6ZMW2 699 aaPredicted RBP12.02□□□□□ -0.49
SNX1-201ENST00000261889 IKBIPQ70UQ0 350 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 CMTM4Q8IZR5 234 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 SLC44A3Q8N4M1 653 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 RPLP0P6Q8NHW5 317 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 RSPRY1Q96DX4 576 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 GPR137Q96N19 417 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 TEAD3Q99594 435 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 ULBP3Q9BZM4 244 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 TRIM36Q9NQ86 728 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 ADAM30Q9UKF2 790 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 RWDD3Q9Y3V2 267 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 ARHGEF17Q96PE2 2063 aaPredicted RBP12.02□□□□□ -0.49
SNX1-201ENST00000261889 MTCL1Q9Y4B5 1905 aaKnown RBP12.02□□□□□ -0.49
SNX1-201ENST00000261889 CXCL2P19875 107 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 ATP5A1P25705 553 aaKnown RBP12.02□□□□□ -0.49
SNX1-201ENST00000261889 AK4P27144 223 aaPredicted RBP12.02□□□□□ -0.49
SNX1-201ENST00000261889 RAB14P61106 215 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 MPP7Q5T2T1 576 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 MRPL2Q5T653 305 aaKnown RBP12.02□□□□□ -0.49
SNX1-201ENST00000261889 TIGD3Q6B0B8 471 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 POMZP3Q6PJE2 187 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 OR2A1Q8NGT9 310 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 ACOT11Q8WXI4 607 aaPredicted RBP12.02□□□□□ -0.49
SNX1-201ENST00000261889 UBE2E3Q969T4 207 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 ELP4Q96EB1 424 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 RETREG1Q9H6L5 497 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 FOLH1BQ9HBA9 442 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 KCNE5Q9UJ90 142 aa12.02□□□□□ -0.49
SNX1-201ENST00000261889 LRRK1Q38SD2 2015 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 G3V3Q6 166 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 SLC31A1O15431 190 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 EML2O95834 649 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 CSN2P05814 226 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 TPOP07202 933 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 PVRP15151 417 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 GSTM3P21266 225 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 BMP8BP34820 402 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 ZNF85Q03923 595 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 SQSTM1Q13501 440 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 ELOAQ14241 798 aaKnown RBP12.01□□□□□ -0.49
SNX1-201ENST00000261889 FAAH2Q6GMR7 532 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 MFSD12Q6NUT3 480 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 TMEM81Q6P7N7 255 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 OR5M1Q8NGP8 315 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 OSTF1Q92882 214 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 NXPE2Q96DL1 559 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 ZC3HAV1LQ96H79 300 aaKnown RBP12.01□□□□□ -0.49
SNX1-201ENST00000261889 NDC1Q9BTX1 674 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 ZMAT3Q9HA38 289 aaKnown RBP12.01□□□□□ -0.49
SNX1-201ENST00000261889 SLC6A20Q9NP91 592 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 ZC4H2Q9NQZ6 224 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 UBQLN2Q9UHD9 624 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 GTF2A1LQ9UNN4 478 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 A0A0A6YYD5 115 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 OR6C74A6NCV1 312 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 TBC1D3BA6NDS4 549 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 H0YC42 278 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 CEBPBP17676 345 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 LCN1P31025 176 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 FOXK2Q01167 660 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 MFSD13AQ14CX5 517 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 ZNF658BQ4V348 819 aaPredicted RBP12.01□□□□□ -0.49
SNX1-201ENST00000261889 RNF44Q7L0R7 432 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 OR4N2Q8NGD1 307 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 OR4D10Q8NGI6 311 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 CCL4L1Q8NHW4 92 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 ANGPTL6Q8NI99 470 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 KIAA1143Q96AT1 154 aaPredicted RBP12.01□□□□□ -0.49
SNX1-201ENST00000261889 MS4A6EQ96DS6 147 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 B3GNT4Q9C0J1 378 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 MRPS30Q9NP92 439 aaKnown RBP12.01□□□□□ -0.49
SNX1-201ENST00000261889 KLHL28Q9NXS3 571 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 GXYLT2A0PJZ3 443 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 C5orf67F2Z3F1 127 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 MOSPD3O75425 235 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 EGFP01133 1207 aa12.01□□□□□ -0.49
SNX1-201ENST00000261889 ZNF888P0CJ79 500 aaPredicted RBP12.01□□□□□ -0.49
SNX1-201ENST00000261889 CSNK2A2P19784 350 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms