RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CHRM4P08173 479 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 ELK4P28324 431 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 SIRPAP78324 504 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 PRAMEF17Q5VTA0 474 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 PAPD5Q8NDF8 572 aaKnown RBP12.94□□□□□ -0.34
CDH1-201ENST00000261769 ANKRD10Q9NXR5 420 aa12.94□□□□□ -0.34
CDH1-201ENST00000261769 DIRAS3O95661 229 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 MTHFD2P13995 350 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 OR2A1Q8NGT9 310 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 DNTTIP1Q9H147 329 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 ATG5Q9H1Y0 275 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 CHST8Q9H2A9 424 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 METTL8Q9H825 291 aaKnown RBP12.93□□□□□ -0.34
CDH1-201ENST00000261769 ZNF701Q9NV72 531 aaPredicted RBP12.93□□□□□ -0.34
CDH1-201ENST00000261769 A8MVM7 634 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 FAM171A2A8MVW0 826 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 LRRN3E7EW58 273 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 PRKRAO75569 313 aaKnown RBP12.93□□□□□ -0.34
CDH1-201ENST00000261769 RGS9O75916 674 aaPredicted RBP12.93□□□□□ -0.34
CDH1-201ENST00000261769 COL9A1P20849 921 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 VAMP1P23763 118 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 MOGQ16653 247 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 NADK2Q4G0N4 442 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 OR2T11Q8NH01 316 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 ALG14Q96F25 216 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 LRFN1Q9P244 771 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 AASSQ9UDR5 926 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 WDR37Q9Y2I8 494 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 KCNIP3Q9Y2W7 256 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 PRAMEF33A0A0G2JMD5 474 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 PRAMEF10O60809 474 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 SCGNO76038 276 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 UCHL1P09936 223 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 STT3AP46977 705 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 IST1P53990 364 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 ZMYND11Q15326 602 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 CAMKMTQ7Z624 323 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 ZNF584Q8IVC4 421 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 B3GNT7Q8NFL0 401 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 OR1N1Q8NGS0 311 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 GPR148Q8TDV2 347 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 FAM71F1Q96KD3 344 aaPredicted RBP12.93□□□□□ -0.34
CDH1-201ENST00000261769 A4GALTQ9NPC4 353 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 FBXO4Q9UKT5 387 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 PPICP45877 212 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 GABARAPL2P60520 117 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 SLC41A2Q96JW4 573 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 SLC5A7Q9GZV3 580 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 SAP130Q9H0E3 1048 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 ERVK-18Q9QC07 812 aa12.93□□□□□ -0.34
CDH1-201ENST00000261769 DLGAP1O14490 977 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 B3GALT4O96024 378 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 ZGLP1P0C6A0 271 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 CLDN17P56750 224 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 PROX2Q3B8N5 592 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 SLC36A2Q495M3 483 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 TMEM215Q68D42 235 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 NIPAL3Q6P499 406 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 BAIAP2L2Q6UXY1 529 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 GRINAQ7Z429 371 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 SAMD12Q8N8I0 201 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 LSM14AQ8ND56 463 aaKnown RBP12.92□□□□□ -0.34
CDH1-201ENST00000261769 DPAGT1Q9H3H5 408 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 LOC105369274A0A096LPK9 316 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 PRKYO43930 277 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 RBBP9O75884 186 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 PEX11BO96011 259 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 MS4A2Q01362 244 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 TSPAN31Q12999 210 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 HNRNPA0Q13151 305 aaKnown RBP12.92□□□□□ -0.34
CDH1-201ENST00000261769 RAB11BQ15907 218 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 SLC6A19Q695T7 634 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 PYHIN1Q6K0P9 492 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 ZNF613Q6PF04 617 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 AKAP14Q86UN6 197 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 IGFN1Q86VF2 1251 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 ADGRG5Q8IZF4 528 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 OR4N4Q8N0Y3 316 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 SLC16A11Q8NCK7 471 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 NRSN2Q9GZP1 204 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 TBC1D24Q9ULP9 559 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 RGPD4Q7Z3J3 1758 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 STK17BO94768 372 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 ZXDAP98168 799 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 SLC10A1Q14973 349 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 ARHGAP22Q7Z5H3 698 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 OLIG1Q8TAK6 271 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 LIN28AQ9H9Z2 209 aaKnown RBP12.92□□□□□ -0.34
CDH1-201ENST00000261769 TTC3P53804 2025 aa12.92□□□□□ -0.34
CDH1-201ENST00000261769 A0A1W2PR48 441 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 FIGNL2A6NMB9 653 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 CLCA1A8K7I4 914 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ZNF587BE7ETH6 402 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 CFL1P23528 166 aaKnown RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 PGGHGQ32M88 737 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 GUSBP11Q6P575 273 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ABHD5Q8WTS1 349 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 FCAMRQ8WWV6 532 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ASB17Q8WXJ9 295 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 OR10A4Q9H209 315 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms