RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PRR22Q8IZ63 422 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 GATSQ8NAP1 163 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 C3orf49Q96BT1 292 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 SEMA4CQ9C0C4 833 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 BAIAP2Q9UQB8 552 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 A0A1W2PQD3 144 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 GTPBP1O00178 669 aaKnown RBP25.34■■□□□ 1.65
CCM2-201ENST00000258781 AIREO43918 545 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 ICOSLGO75144 302 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 CDH11P55287 796 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 VBP1P61758 197 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 PIP4P1Q86T03 277 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 SLC19A3Q9BZV2 496 aa25.34■■□□□ 1.65
CCM2-201ENST00000258781 HTR3EA5X5Y0 456 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 SAGE2PA6NJ88 616 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 M0R3G1 203 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 OIP5O43482 229 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 PPM1BO75688 479 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 GADD45AP24522 165 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 CCKBRP32239 447 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 PNLIPRP2P54317 469 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 CRYZQ08257 329 aaKnown RBP25.33■■□□□ 1.65
CCM2-201ENST00000258781 CACTIN-AS1Q8N1I8 211 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 NDNFQ8TB73 568 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 METTL21AQ8WXB1 218 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 RPL3LQ92901 407 aaKnown RBP25.33■■□□□ 1.65
CCM2-201ENST00000258781 OMA1Q96E52 524 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 PHOX2BQ99453 314 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 LAT2Q9GZY6 243 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 SLC26A1Q9H2B4 701 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 CLEC2DQ9UHP7 191 aa25.33■■□□□ 1.65
CCM2-201ENST00000258781 PPIEQ9UNP9 301 aaKnown RBP25.33■■□□□ 1.65
CCM2-201ENST00000258781 CLPXO76031 633 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 CYC1P08574 325 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 HSMCR30P0CW71 290 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 LSM3P62310 102 aaKnown RBP25.32■■□□□ 1.64
CCM2-201ENST00000258781 SPHARQ15513 63 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 C19orf48Q6RUI8 117 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 OAFQ86UD1 273 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 NFAM1Q8NET5 270 aaPredicted RBP25.32■■□□□ 1.64
CCM2-201ENST00000258781 PMEPA1Q969W9 287 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 TP53INP1Q96A56 240 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 SGTBQ96EQ0 304 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 ENKD1Q9H0I2 346 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 CARD8Q9Y2G2 431 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 CDC14CA4D256 554 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 MYL12BO14950 172 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 CSO75390 466 aaKnown RBP25.32■■□□□ 1.64
CCM2-201ENST00000258781 PNMTP11086 282 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 ENDOUP21128 410 aaKnown RBP25.32■■□□□ 1.64
CCM2-201ENST00000258781 HTR1FP30939 366 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 SLC6A8P48029 635 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 NCS1P62166 190 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 THSD4Q6ZMP0 1018 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 GVINP1Q7Z2Y8 2422 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 GID4Q8IVV7 300 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 IFT27Q9BW83 186 aa25.32■■□□□ 1.64
CCM2-201ENST00000258781 HINT3Q9NQE9 182 aaKnown RBP25.32■■□□□ 1.64
CCM2-201ENST00000258781 TRAV27A0A087WT01 109 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 CCRL2O00421 344 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 SLC2A10O95528 541 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 IGF2P01344 180 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 SCG5P05408 212 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 MYL12AP19105 171 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 ABCD3P28288 659 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 CLK1P49759 484 aaKnown RBP25.31■■□□□ 1.64
CCM2-201ENST00000258781 EMP2P54851 167 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 RNF4P78317 190 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 C1DQ13901 141 aaKnown RBP25.31■■□□□ 1.64
CCM2-201ENST00000258781 CXXC5Q7LFL8 322 aaKnown RBP25.31■■□□□ 1.64
CCM2-201ENST00000258781 SLCO6A1Q86UG4 719 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 TMCO5AQ8N6Q1 288 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 OPALINQ96PE5 141 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 TAPBPLQ9BX59 468 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 CMC2Q9NRP2 79 aa25.31■■□□□ 1.64
CCM2-201ENST00000258781 EXOSC1Q9Y3B2 195 aaKnown RBP25.31■■□□□ 1.64
CCM2-201ENST00000258781 ALG1L2C9J202 215 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 CPNE3O75131 537 aaKnown RBP25.3■■□□□ 1.64
CCM2-201ENST00000258781 SLC6A6P31641 620 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 SLC9A3P48764 834 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 FOXL2P58012 376 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 FHL1Q13642 323 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 TSTQ16762 297 aaKnown RBP25.3■■□□□ 1.64
CCM2-201ENST00000258781 RTL4Q6ZR62 310 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 LSRQ86X29 649 aaPredicted RBP25.3■■□□□ 1.64
CCM2-201ENST00000258781 OR51A7Q8NH64 312 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 DYNC2LI1Q8TCX1 351 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 MCCC2Q9HCC0 563 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 H2AFY2Q9P0M6 372 aaPredicted RBP25.3■■□□□ 1.64
CCM2-201ENST00000258781 PCDHGA3Q9Y5H0 932 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 IGHV3-20A0A0C4DH32 117 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 UGT2B10P36537 528 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 CCR4P51679 360 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 KHDRBS1Q07666 443 aaKnown RBP eCLIP25.3■■□□□ 1.64
CCM2-201ENST00000258781 TIMM50Q3ZCQ8 353 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 CBLN3Q6UW01 205 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 ATG4DQ86TL0 474 aaPredicted RBP25.3■■□□□ 1.64
CCM2-201ENST00000258781 CPOQ8IVL8 374 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 TNFRSF13CQ96RJ3 184 aa25.3■■□□□ 1.64
CCM2-201ENST00000258781 CHCHD3Q9NX63 227 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms