RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SHISA9B4DS77 424 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 ZNF264O43296 627 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 PEX11AO75192 247 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 NUDT14O95848 222 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 ADAP00813 363 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 CD8AP01732 235 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 IGHV4-39P01824 125 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 RPLP1P05386 114 aaKnown RBP9.12□□□□□ -0.95
VPS50-201ENST00000251739 CD3EP07766 207 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 NUDT17P0C025 328 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 UBL4AP11441 157 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 PRPS1L1P21108 318 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 SERPINB5P36952 375 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 HBA1P69905 142 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 PLAURQ03405 335 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 QPRTQ15274 297 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 ZNF141Q15928 474 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 CLEC12BQ2HXU8 276 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 LSM12Q3MHD2 195 aaKnown RBP9.12□□□□□ -0.95
VPS50-201ENST00000251739 PDZK1Q5T2W1 519 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 ABLIM2Q6H8Q1 611 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 HEPHL1Q6MZM0 1159 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 C3orf33Q6P1S2 294 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 ZCCHC23Q6ZST2 131 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 CXXC5Q7LFL8 322 aaKnown RBP9.12□□□□□ -0.95
VPS50-201ENST00000251739 BHLHA15Q7RTS1 189 aaPredicted RBP9.12□□□□□ -0.95
VPS50-201ENST00000251739 ZNF619Q8N2I2 560 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 OR5D16Q8NGK9 328 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 SPATA3Q8NHX4 192 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 MIPOL1Q8TD10 442 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 SMAP2Q8WU79 429 aaPredicted RBP9.12□□□□□ -0.95
VPS50-201ENST00000251739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS50-201ENST00000251739 ST8SIA1Q92185 356 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 REXO5Q96IC2 774 aaKnown RBP9.12□□□□□ -0.95
VPS50-201ENST00000251739 OR7D2Q96RA2 312 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 TRAF4Q9BUZ4 470 aaPredicted RBP9.12□□□□□ -0.95
VPS50-201ENST00000251739 BHLHE41Q9C0J9 482 aaPredicted RBP9.12□□□□□ -0.95
VPS50-201ENST00000251739 ZNF350Q9GZX5 532 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 L2HGDHQ9H9P8 463 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 NGBQ9NPG2 151 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 ASIC5Q9NY37 505 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 NPAP1Q9NZP6 1156 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 FAF1Q9UNN5 650 aaPredicted RBP9.12□□□□□ -0.95
VPS50-201ENST00000251739 SVEP1Q4LDE5 3571 aa9.12□□□□□ -0.95
VPS50-201ENST00000251739 A0A096LNT2 108 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 IGHV3-15A0A0B4J1V0 119 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 SERINC4A6NH21 518 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 CLOCKO15516 846 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 KIAA0513O60268 411 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 FCMRO60667 390 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 SCN2BO60939 215 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 PGM3O95394 542 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 AK1P00568 194 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 GUSBP08236 651 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 SLC7A1P30825 629 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 CDKN1AP38936 164 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 RPS26P62854 115 aaKnown RBP9.11□□□□□ -0.95
VPS50-201ENST00000251739 DMTNQ08495 405 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 RASGEF1BQ0VAM2 473 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 VEZF1Q14119 521 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 TIGD2Q4W5G0 525 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 ATP6AP1LQ52LC2 224 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 IL23RQ5VWK5 629 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 RIBC1Q8N443 379 aaPredicted RBP9.11□□□□□ -0.95
VPS50-201ENST00000251739 OR5AK3PQ8NH89 298 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 OR2W6PQ8NHA6 318 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 OIT3Q8WWZ8 545 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 CHMP6Q96FZ7 201 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 ZNF300Q96RE9 604 aaPredicted RBP9.11□□□□□ -0.95
VPS50-201ENST00000251739 DUSP26Q9BV47 211 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 REG4Q9BYZ8 158 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 LAT2Q9GZY6 243 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 QRSL1Q9H0R6 528 aaKnown RBP9.11□□□□□ -0.95
VPS50-201ENST00000251739 EML4Q9HC35 981 aaKnown RBP9.11□□□□□ -0.95
VPS50-201ENST00000251739 PRSS50Q9UI38 385 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 ZDHHC2Q9UIJ5 367 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 LIPT1Q9Y234 373 aa9.11□□□□□ -0.95
VPS50-201ENST00000251739 A0A1W2PP18 115 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 ZNF716A6NP11 495 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 GTPBP1O00178 669 aaKnown RBP9.1□□□□□ -0.95
VPS50-201ENST00000251739 RAMP1O60894 148 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 NDUFS7O75251 213 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 BCAS1O75363 584 aaPredicted RBP9.1□□□□□ -0.95
VPS50-201ENST00000251739 SKAP2O75563 359 aaPredicted RBP9.1□□□□□ -0.95
VPS50-201ENST00000251739 UGT2B17O75795 530 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 LYZL6O75951 148 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 SLU7O95391 586 aaKnown RBP9.1□□□□□ -0.95
VPS50-201ENST00000251739 FESP07332 822 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 G6PDP11413 515 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 IGHV1-2P23083 117 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 IDUAP35475 653 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 ACVR1BP36896 505 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 ETV4P43268 484 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 DIO1P49895 249 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 CLDN8P56748 225 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 SESN3P58005 492 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 FUT5Q11128 374 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 CBFBQ13951 182 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 PDK3Q15120 406 aa9.1□□□□□ -0.95
VPS50-201ENST00000251739 MAPK14Q16539 360 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms