RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NPR2P20594 1047 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 PAICSP22234 425 aaKnown RBP15.7■□□□□ 0.1
FOXA1-201ENST00000250448 PRR5P85299 388 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 TGM3Q08188 693 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 SLC9A5Q14940 896 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 TMEM99Q8N816 258 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 TMEM255BQ8WV15 326 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 SLC41A3Q96GZ6 507 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 MCHR1Q99705 422 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 DPAGT1Q9H3H5 408 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 RANBP3Q9H6Z4 567 aaPredicted RBP15.7■□□□□ 0.1
FOXA1-201ENST00000250448 SLCO1C1Q9NYB5 712 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 OR6C2Q9NZP2 312 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 CALML5Q9NZT1 146 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 SATB2Q9UPW6 733 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 A0A1W2PR48 441 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 A0A1W2PS29 197 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 LINC00862A6NCI5 91 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 EMC8O43402 210 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 THY1P04216 161 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 ANXA3P12429 323 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 TYRP1P17643 537 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 MAZP56270 477 aaKnown RBP15.7■□□□□ 0.1
FOXA1-201ENST00000250448 SRSF5Q13243 272 aaKnown RBP15.7■□□□□ 0.1
FOXA1-201ENST00000250448 KRT74Q7RTS7 529 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 ZNF655Q8N720 491 aaPredicted RBP15.7■□□□□ 0.1
FOXA1-201ENST00000250448 OR8K5Q8NH50 307 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 MARVELD3Q96A59 401 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 TBX5Q99593 518 aa15.7■□□□□ 0.1
FOXA1-201ENST00000250448 A0A1W2PR77 199 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 M6PRP20645 277 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 PRKAR1BP31321 381 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 SHC2P98077 582 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 TMEM35AQ53FP2 167 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 NIPAL3Q6P499 406 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 SFXN4Q6P4A7 337 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 PLBD1Q6P4A8 553 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 TEX261Q6UWH6 196 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 C16orf62Q7Z3J2 963 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 LMX1AQ8TE12 382 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 ZFPM2Q8WW38 1151 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 HSD17B8Q92506 261 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 TRIM36Q9NQ86 728 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 EIF3KQ9UBQ5 218 aaKnown RBP15.69■□□□□ 0.1
FOXA1-201ENST00000250448 ATG4BQ9Y4P1 393 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 U3KQ87 197 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 OR5F1O95221 314 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 AIFM1O95831 613 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 PTNP21246 168 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 F8A1P23610 371 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 NDUFS1P28331 727 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 CMPK1P30085 196 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 MC3RP41968 323 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 OR10A3P58181 314 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 CCNJQ5T5M9 372 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 FAM27D1Q5T7N8 215 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 HACD4Q5VWC8 232 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 PYHIN1Q6K0P9 492 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 NUP43Q8NFH3 380 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 ZDHHC1Q8WTX9 485 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 TIMP4Q99727 224 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 UBQLN3Q9H347 655 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 NUBP2Q9Y5Y2 271 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 ZC3H12DA2A288 527 aaKnown RBP15.69■□□□□ 0.1
FOXA1-201ENST00000250448 CDC42EP2O14613 210 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 ERI3O43414 337 aaKnown RBP15.69■□□□□ 0.1
FOXA1-201ENST00000250448 SOX30O94993 753 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 ZIC2O95409 532 aaPredicted RBP15.69■□□□□ 0.1
FOXA1-201ENST00000250448 TPOP07202 933 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 UGT2B7P16662 529 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 AHRP35869 848 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 SRP9P49458 86 aaKnown RBP15.69■□□□□ 0.1
FOXA1-201ENST00000250448 CD276Q5ZPR3 534 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 ARL9Q6T311 187 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 UBALD2Q8IYN6 164 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 ZNF680Q8NEM1 530 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 TRMT10AQ8TBZ6 339 aaKnown RBP15.69■□□□□ 0.1
FOXA1-201ENST00000250448 ABHD1Q96SE0 405 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 OR51J1Q9H342 316 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 MED20Q9H944 212 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 GLTPQ9NZD2 209 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 PTTG3PQ9NZH4 202 aa15.69■□□□□ 0.1
FOXA1-201ENST00000250448 RAF1P04049 648 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 CSNK2A2P19784 350 aaPredicted RBP15.68■□□□□ 0.1
FOXA1-201ENST00000250448 FLVCR1-AS1Q8TAF5 88 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 OR2M2Q96R28 347 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 NARFLQ9H6Q4 476 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 AUP1Q9Y679 476 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 THADAQ6YHU6 1953 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 A0A0G2JK05 382 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 HIST1H1TP22492 207 aaPredicted RBP15.68■□□□□ 0.1
FOXA1-201ENST00000250448 LSSP48449 732 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 ARFIP1P53367 373 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 HHEXQ03014 270 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 C18orf63Q68DL7 685 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 LUZP2Q86TE4 346 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 TTLQ8NG68 377 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 OR11H4Q8NGC9 324 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 OR5W2Q8NH69 310 aa15.68■□□□□ 0.1
FOXA1-201ENST00000250448 ACTR10Q9NZ32 417 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms