RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 ZBED5Q49AG3 693 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 TRMT12Q53H54 448 aaKnown RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CDKL4Q5MAI5 379 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 SPANXN3Q5MJ09 141 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 HP1BP3Q5SSJ5 553 aaPredicted RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CTRB2Q6GPI1 263 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ZNF544Q6NX49 715 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 TMEM108Q6UXF1 575 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 B3GLCTQ6Y288 498 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 SSX8Q7RTT4 187 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 PEG10Q86TG7 708 aaKnown RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CEP19Q96LK0 163 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 C1orf50Q9BV19 199 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 RBM4Q9BWF3 364 aaKnown RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 SHCBP1LQ9BZQ2 653 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 BPESC1Q9GZL8 116 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 SDHAF3Q9NRP4 125 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CD274Q9NZQ7 290 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 MGAT4BQ9UQ53 548 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CMYA5Q8N3K9 4069 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 RYR3Q15413 4870 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 LRP5LA4QPB2 252 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 K7EPI3 171 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ADAMDEC1O15204 470 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 DNAJA2O60884 412 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 LYZL6O75951 148 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ALX3O95076 343 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CRYZL1O95825 349 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 DHRS4L1P0CG22 281 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CT45A8P0DMV1 189 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CT45A9P0DMV2 189 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 FEN1P39748 380 aaKnown RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 TAS2R39P59534 338 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 TXNL4AP83876 142 aaKnown RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 SPOCK1Q08629 439 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 DLG1Q12959 904 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ACAP2Q15057 778 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 TMEM44Q2T9K0 475 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 KCTD21Q4G0X4 260 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 CT45A2Q5DJT8 189 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 GRHL2Q6ISB3 625 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 VASH1Q7L8A9 365 aaPredicted RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 LRRC70Q7Z2Q7 622 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 NUFIP2Q7Z417 695 aaKnown RBP10.55□□□□□ -0.72
RFPL3-201ENST00000249007 LINC01356Q8N9X3 169 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ZNF540Q8NDQ6 660 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ABHD3Q8WU67 409 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ADGRG7Q96K78 797 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 TRMOQ9BU70 441 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 ZNF747Q9BV97 191 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 RMND5AQ9H871 391 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 THAP1Q9NVV9 213 aa10.55□□□□□ -0.72
RFPL3-201ENST00000249007 B2RBV5 119 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 TNFSF11O14788 317 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 BAG2O95816 211 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 OPN1LWP04000 364 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 NAT2P11245 290 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 HOXB1P14653 301 aaPredicted RBP10.54□□□□□ -0.72
RFPL3-201ENST00000249007 PCSK2P16519 638 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 PCMT1P22061 227 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 GNG2P59768 71 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 HILS1P60008 231 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 PSPHP78330 225 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 LSM12Q3MHD2 195 aaKnown RBP10.54□□□□□ -0.72
RFPL3-201ENST00000249007 TIMM23BQ5SRD1 257 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 PGM2L1Q6PCE3 622 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 DEF8Q6ZN54 512 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 RAPH1Q70E73 1250 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 ANKMY2Q8IV38 441 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 SPATA6LQ8N4H0 392 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 VPS37AQ8NEZ2 397 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 TSPAN14Q8NG11 270 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 OR2V1Q8NHB1 315 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 UHMK1Q8TAS1 419 aaKnown RBP10.54□□□□□ -0.72
RFPL3-201ENST00000249007 REXO5Q96IC2 774 aaKnown RBP10.54□□□□□ -0.72
RFPL3-201ENST00000249007 INPP5KQ9BT40 448 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 CD244Q9BZW8 370 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 DERL2Q9GZP9 239 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 SAYSD1Q9NPB0 183 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 KLHL13Q9P2N7 655 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 SLC7A8Q9UHI5 535 aa10.54□□□□□ -0.72
RFPL3-201ENST00000249007 FAM95CA0A1B0GW59 222 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 EVPLLA8MZ36 301 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 ZNF814B7Z6K7 855 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 H3BSA7 217 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 TYROBPO43914 113 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 GMFGO60234 142 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 NME6O75414 186 aaPredicted RBP10.53□□□□□ -0.72
RFPL3-201ENST00000249007 BANF1O75531 89 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 ERAL1O75616 437 aaKnown RBP10.53□□□□□ -0.72
RFPL3-201ENST00000249007 S100BP04271 92 aaPredicted RBP10.53□□□□□ -0.72
RFPL3-201ENST00000249007 CSNK2A2P19784 350 aaPredicted RBP10.53□□□□□ -0.72
RFPL3-201ENST00000249007 PTAFRP25105 342 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 APEX1P27695 318 aaKnown RBP10.53□□□□□ -0.72
RFPL3-201ENST00000249007 LIMS1P48059 325 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 AQP4P55087 323 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 GPX6P59796 221 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 STX1BP61266 288 aa10.53□□□□□ -0.72
RFPL3-201ENST00000249007 RNPS1Q15287 305 aaKnown RBP10.53□□□□□ -0.72
RFPL3-201ENST00000249007 LTB4RQ15722 352 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms