RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 RPS4Y1P22090 263 aaKnown RBP18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 ENPP1P22413 925 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 DNASE1P24855 282 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 IDH2P48735 452 aaKnown RBP18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 RAC3P60763 192 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 SYT14P1Q58G82 188 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 MRPL2Q5T653 305 aaKnown RBP18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 AP1ARQ63HQ0 302 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 PAMR1Q6UXH9 720 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 TUSC5Q8IXB3 177 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 CMIPQ8IY22 773 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 PEX5LQ8IYB4 626 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 SLC25A43Q8WUT9 341 aaPredicted RBP18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 NINJ1Q92982 152 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 DNAJA3Q96EY1 480 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 THOC1Q96FV9 657 aaKnown RBP18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 CCDC28BQ9BUN5 200 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 EDARQ9UNE0 448 aa18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 SPIN1Q9Y657 262 aaPredicted RBP18.85■□□□□ 0.61
HCFC1R1-201ENST00000248089 ADAM11O75078 769 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 DBIP07108 87 aaKnown RBP18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 CCNA2P20248 432 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 APOBEC1P41238 236 aaKnown RBP18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 MAGEA8P43361 318 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 DIO1P49895 249 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 MAPK11Q15759 364 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 RPS26P11Q5JNZ5 115 aaPredicted RBP18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 NUFIP2Q7Z417 695 aaKnown RBP18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 GRINAQ7Z429 371 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 GTF2H4Q92759 462 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 CCDC106Q9BWC9 280 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 PAIP1Q9H074 479 aaKnown RBP18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 FANCFQ9NPI8 374 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 CALML5Q9NZT1 146 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 CCDC167Q9P0B6 97 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 CHRNA9Q9UGM1 479 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 PCDHB14Q9Y5E9 798 aa18.84■□□□□ 0.61
HCFC1R1-201ENST00000248089 TMEM247A6NEH6 219 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 FESP07332 822 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 KLK2P20151 261 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 CRISP3P54108 245 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 BEND4Q6ZU67 534 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 LSRQ86X29 649 aaPredicted RBP18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 VRK2Q86Y07 508 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 SLC43A2Q8N370 569 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 OR52P1PQ8NH57 321 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 SLC38A5Q8WUX1 472 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 CKAP2Q8WWK9 683 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 SPDL1Q96EA4 605 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 PIK3IP1Q96FE7 263 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 MAGEB18Q96M61 343 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 CACYBPQ9HB71 228 aaKnown RBP18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 KLHL9Q9P2J3 617 aa18.83■□□□□ 0.6
HCFC1R1-201ENST00000248089 ITPR3Q14573 2671 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 A0A1W2PPR1 153 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 SULT2B1O00204 365 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 CLIC1O00299 241 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 SMAD9O15198 467 aaKnown RBP18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 SIAH2O43255 324 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 SASH3O75995 380 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 RAF1P04049 648 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 CD1EP15812 388 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 CRYGSP22914 178 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 MRPL19P49406 292 aaKnown RBP18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 CSNK2A1P68400 391 aaPredicted RBP18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 LIN52Q52LA3 116 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 BLOC1S3Q6QNY0 202 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 STAC2Q6ZMT1 411 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 ZNF836Q6ZNA1 936 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 FUNDC1Q8IVP5 155 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 TMEM19Q96HH6 336 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 OR11A1Q9GZK7 315 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 RAD21L1Q9H4I0 556 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 PLEKHF2Q9H8W4 249 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 RLIMQ9NVW2 624 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 THUMPD1Q9NXG2 353 aaKnown RBP18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 MED13LQ71F56 2210 aa18.82■□□□□ 0.6
HCFC1R1-201ENST00000248089 DSPPQ9NZW4 1301 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 A0A096LPI6 279 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 CFAP73A6NFT4 308 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 DEFB108AA8MXU0 73 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 YES1P07947 543 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 TFPTP0C1Z6 253 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 UQCRBP14927 111 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 RASGEF1BQ0VAM2 473 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 KEAP1Q14145 624 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 SQLEQ14534 574 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 RGNQ15493 299 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 AGKQ53H12 422 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 TFAP2EQ6VUC0 442 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 SPNS3Q6ZMD2 512 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 TMPPEQ6ZT21 453 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 PMM1Q92871 262 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 ARL5BQ96KC2 179 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 PSD2Q9BQI7 771 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 TACO1Q9BSH4 297 aaKnown RBP18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 ACTR6Q9GZN1 396 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 GP6Q9HCN6 339 aa18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 ZNF443Q9Y2A4 671 aaPredicted RBP18.81■□□□□ 0.6
HCFC1R1-201ENST00000248089 TMED7-TICAM2A0A0A6YYA0 188 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms