RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 GABRA4P48169 554 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 FAM53BQ14153 422 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 UTS2BQ765I0 119 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 ARL14Q8N4G2 192 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 OR4N2Q8NGD1 307 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 GRHL3Q8TE85 626 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 DCLRE1CQ96SD1 692 aaKnown RBP20.19■□□□□ 0.82
RNF39-201ENST00000244360 TIMP4Q99727 224 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 HCAR1Q9BXC0 346 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 GON7Q9BXV9 100 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 MED20Q9H944 212 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 SLC2A4RGQ9NR83 387 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 IGHV1OR15-9A0A0B4J2B8 117 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 LILRA5A6NI73 299 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 HRKO00198 91 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 SLC43A1O75387 559 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 FAM157BP0CG42 384 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 CD83Q01151 205 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 STX4Q12846 297 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 NPSR1Q6W5P4 371 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 ZNF687Q8N1G0 1237 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 SLC43A2Q8N370 569 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 FAM160A2Q8N612 972 aaPredicted RBP20.19■□□□□ 0.82
RNF39-201ENST00000244360 OR6C4Q8NGE1 309 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 RBM18Q96H35 190 aaKnown RBP20.19■□□□□ 0.82
RNF39-201ENST00000244360 PEX11GQ96HA9 241 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 UBL7Q96S82 380 aaPredicted RBP20.19■□□□□ 0.82
RNF39-201ENST00000244360 MAP3K3Q99759 626 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 IFT27Q9BW83 186 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 RNF32Q9H0A6 362 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 NIPAL2Q9H841 368 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 CAPN10Q9HC96 672 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.19■□□□□ 0.82
RNF39-201ENST00000244360 BAIAP2Q9UQB8 552 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 SLC35A3Q9Y2D2 325 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 DTX4Q9Y2E6 619 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 ORC5O43913 435 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 SAGP10523 405 aaPredicted RBP20.18■□□□□ 0.82
RNF39-201ENST00000244360 NME1P15531 152 aaKnown RBP20.18■□□□□ 0.82
RNF39-201ENST00000244360 GPR3P46089 330 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 RFX3P48380 749 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 SRSF5Q13243 272 aaKnown RBP20.18■□□□□ 0.82
RNF39-201ENST00000244360 FGFBP1Q14512 234 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 ELOCQ15369 112 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 P2RY14Q15391 338 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 LINC00114Q6XXX2 140 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 KLBQ86Z14 1044 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 PTP4A1Q93096 173 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 ARSGQ96EG1 525 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 MARVELD1Q9BSK0 173 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 B3GAT2Q9NPZ5 323 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 PRTFDC1Q9NRG1 225 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 INPP5EQ9NRR6 644 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 ALG5Q9Y673 324 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 MAU2Q9Y6X3 613 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 C12orf71A8MTZ7 269 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 RNF13O43567 381 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 PRAMEF2O60811 474 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 WNT1P04628 370 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 PROS1P07225 676 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 CD53P19397 219 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 RACK1P63244 317 aaKnown RBP20.18■□□□□ 0.82
RNF39-201ENST00000244360 FHL1Q13642 323 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 UBE2J2Q8N2K1 259 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 TMEM99Q8N816 258 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 ZNF614Q8N883 585 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 SLC37A3Q8NCC5 494 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 TSTD1Q8NFU3 115 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 RLN3Q8WXF3 142 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 KCTD12Q96CX2 325 aaKnown RBP20.18■□□□□ 0.82
RNF39-201ENST00000244360 PTCHD1Q96NR3 888 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 NDEL1Q9GZM8 345 aa20.18■□□□□ 0.82
RNF39-201ENST00000244360 TRAV27A0A087WT01 109 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 CD8B2A6NJW9 211 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 SLC22A31A6NKX4 558 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 GTPBP1O00178 669 aaKnown RBP20.17■□□□□ 0.82
RNF39-201ENST00000244360 ZNF749O43361 778 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 ZNF217O75362 1048 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 NGFRP08138 427 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 CD8BP10966 210 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 SLC2A5P22732 501 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 RAB25P57735 213 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 TRAM1Q15629 374 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 B3GLCTQ6Y288 498 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 TMEM91Q6ZNR0 172 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 PLCZ1Q86YW0 608 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 ZFAND1Q8TCF1 268 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 ZNF578Q96N58 590 aaPredicted RBP20.17■□□□□ 0.82
RNF39-201ENST00000244360 ING3Q9NXR8 418 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 MALT1Q9UDY8 824 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 DNAH14Q0VDD8 3507 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 A0A1W2PR77 199 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 SHISA3A0PJX4 238 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 ZC3H12DA2A288 527 aaKnown RBP20.17■□□□□ 0.82
RNF39-201ENST00000244360 A6NL46 340 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 PRR23D1E9PI22 279 aaPredicted RBP20.17■□□□□ 0.82
RNF39-201ENST00000244360 TDRD6O60522 2096 aaKnown RBP20.17■□□□□ 0.82
RNF39-201ENST00000244360 NCR1O76036 304 aa20.17■□□□□ 0.82
RNF39-201ENST00000244360 PRR23D2P0DMB1 279 aaPredicted RBP20.17■□□□□ 0.82
RNF39-201ENST00000244360 SRFP11831 508 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms