RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 FAM109AQ8N4B1 249 aa18.21■□□□□ 0.51
SNRPA-201ENST00000243563 OR52J3Q8NH60 311 aa18.21■□□□□ 0.51
SNRPA-201ENST00000243563 OR14L1PQ8NHC6 308 aa18.21■□□□□ 0.51
SNRPA-201ENST00000243563 BARD1Q99728 777 aaKnown RBP18.21■□□□□ 0.51
SNRPA-201ENST00000243563 B4GALT7Q9UBV7 327 aa18.21■□□□□ 0.51
SNRPA-201ENST00000243563 DNAJC13O75165 2243 aa18.21■□□□□ 0.51
SNRPA-201ENST00000243563 IGKV1D-42A0A075B6H8 117 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 A0A087WZY1 265 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TRBV4-1A0A0J9YWV2 114 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TMEM72A0PK05 275 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TFECO14948 347 aaPredicted RBP18.2■□□□□ 0.5
SNRPA-201ENST00000243563 CST1P01037 141 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 OPN1LWP04000 364 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 LAPTM4AQ15012 233 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 DCST1Q5T197 706 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 RAET1LQ5VY80 246 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 GRINAQ7Z429 371 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 GTPBP8Q8N3Z3 284 aaPredicted RBP18.2■□□□□ 0.5
SNRPA-201ENST00000243563 CISD2Q8N5K1 135 aaKnown RBP18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TEX19Q8NA77 164 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TMEM255BQ8WV15 326 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 POP5Q969H6 163 aaKnown RBP18.2■□□□□ 0.5
SNRPA-201ENST00000243563 DNAJA3Q96EY1 480 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 FUZQ9BT04 418 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TMEM185BQ9H7F4 350 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 AGPAT4Q9NRZ5 378 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TNFRSF10DQ9UBN6 386 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 RPS6KB2Q9UBS0 482 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TMED7-TICAM2A0A0A6YYA0 188 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 ZC3H12DA2A288 527 aaKnown RBP18.2■□□□□ 0.5
SNRPA-201ENST00000243563 UQCRBP14927 111 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 ITGA2P17301 1181 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 GFRA1P56159 465 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 HSF1Q00613 529 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 C19orf57Q0VDD7 668 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 KLRB1Q12918 225 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 SEC23BQ15437 767 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 OR2T5Q6IEZ7 315 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 ULK3Q6PHR2 472 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TBPL2Q6SJ96 375 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 LINC00114Q6XXX2 140 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 OR4C15Q8NGM1 316 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 OR2T29Q8NH02 315 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 RNF217Q8TC41 542 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 SLC38A4Q969I6 547 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 ZBTB8AQ96BR9 441 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 MRGPRX4Q96LA9 322 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 FNDC11Q9BVV2 318 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 SEMA6AQ9H2E6 1030 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 HHATLQ9HCP6 504 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 TMED7Q9Y3B3 224 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 MRPS18CQ9Y3D5 142 aaKnown RBP18.2■□□□□ 0.5
SNRPA-201ENST00000243563 ZNF337Q9Y3M9 751 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 FAM32AQ9Y421 112 aaKnown RBP18.2■□□□□ 0.5
SNRPA-201ENST00000243563 LYVE1Q9Y5Y7 322 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 U3KQV3 271 aa18.2■□□□□ 0.5
SNRPA-201ENST00000243563 KIAA1549Q9HCM3 1950 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 IGSF10Q6WRI0 2623 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 C7orf72A4D263 438 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 NPIPA5E9PKD4 350 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 ACOT7O00154 380 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 CHP2O43745 196 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 PIP5K1CO60331 668 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 H1F0P07305 194 aaKnown RBP18.19■□□□□ 0.5
SNRPA-201ENST00000243563 PEPDP12955 493 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 LIMS1P48059 325 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 POLR2HP52434 150 aaKnown RBP18.19■□□□□ 0.5
SNRPA-201ENST00000243563 UGT2B15P54855 530 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 ALDH6A1Q02252 535 aaKnown RBP18.19■□□□□ 0.5
SNRPA-201ENST00000243563 EGR4Q05215 589 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 RCN1Q15293 331 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 ATP6AP1Q15904 470 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 INAQ16352 499 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 ZFP1Q6P2D0 407 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 CYP4Z1Q86W10 505 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 HS3ST5Q8IZT8 346 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 SLC7A13Q8TCU3 470 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 TMEM234Q8WY98 164 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 STMN2Q93045 179 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 OR11A1Q9GZK7 315 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 POLR2J2Q9GZM3 115 aaKnown RBP18.19■□□□□ 0.5
SNRPA-201ENST00000243563 POLR2J3Q9H1A7 115 aaKnown RBP18.19■□□□□ 0.5
SNRPA-201ENST00000243563 SPRR3Q9UBC9 169 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 NKX1-2Q9UD57 310 aaPredicted RBP18.19■□□□□ 0.5
SNRPA-201ENST00000243563 NPIPA1Q9UND3 350 aa18.19■□□□□ 0.5
SNRPA-201ENST00000243563 KMT2BQ9UMN6 2715 aaPredicted RBP18.19■□□□□ 0.5
SNRPA-201ENST00000243563 FAM47E-STBD1D6RA91 191 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 H0YHG0 523 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 CLOCKO15516 846 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 HNRNPRO43390 633 aaKnown RBP18.18■□□□□ 0.5
SNRPA-201ENST00000243563 STARP49675 285 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 SLC10A1Q14973 349 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 EXOC3L2Q2M3D2 409 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 C1QL3Q5VWW1 255 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 ZNF324BQ6AW86 544 aaPredicted RBP18.18■□□□□ 0.5
SNRPA-201ENST00000243563 AAGABQ6PD74 315 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 MEX3DQ86XN8 651 aaKnown RBP18.18■□□□□ 0.5
SNRPA-201ENST00000243563 ATP6V1C2Q8NEY4 427 aa18.18■□□□□ 0.5
SNRPA-201ENST00000243563 SNRNP40Q96DI7 357 aaKnown RBP18.18■□□□□ 0.5
SNRPA-201ENST00000243563 WBP1Q96G27 269 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms