RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CACYBPQ9HB71 228 aaKnown RBP7.27□□□□□ -1.25
CXCR4-201ENST00000241393 GALNT9Q9HCQ5 603 aa7.27□□□□□ -1.25
CXCR4-201ENST00000241393 KRCC1Q9NPI7 259 aaPredicted RBP7.27□□□□□ -1.25
CXCR4-201ENST00000241393 POLE4Q9NR33 117 aa7.27□□□□□ -1.25
CXCR4-201ENST00000241393 INIPQ9NRY2 104 aa7.27□□□□□ -1.25
CXCR4-201ENST00000241393 SCML1Q9UN30 329 aa7.27□□□□□ -1.25
CXCR4-201ENST00000241393 GRIP1Q9Y3R0 1128 aa7.27□□□□□ -1.25
CXCR4-201ENST00000241393 CHST2Q9Y4C5 530 aa7.27□□□□□ -1.25
CXCR4-201ENST00000241393 PCDHGB2Q9Y5G2 931 aa7.27□□□□□ -1.25
CXCR4-201ENST00000241393 C2orf16Q68DN1 1984 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 A0A1W2PS29 197 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 URADA6NGE7 173 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 E9PLN8 166 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 CTDSP2O14595 271 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 AP3D1O14617 1153 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 TRIAP1O43715 76 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 KCNK2O95069 426 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 HMGN1P05114 100 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 CHRM5P08912 532 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 GALP22466 123 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 CERS1P27544 350 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 GTF2E2P29084 291 aaKnown RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 FGF9P31371 208 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 SOX3P41225 446 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 OMPP47874 163 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 MTNR1AP48039 350 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 SLC9A3P48764 834 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 PSPHP78330 225 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 ACSM1Q08AH1 577 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 SELENBP1Q13228 472 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 FZD5Q13467 585 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 EIPR1Q53HC9 387 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 C18orf63Q68DL7 685 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 CDC73Q6P1J9 531 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 CD200R1LQ6Q8B3 271 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 CCBE1Q6UXH8 406 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 NCCRP1Q6ZVX7 275 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 MTSS1LQ765P7 747 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 GDPD3Q7L5L3 318 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 RRM2BQ7LG56 351 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 C16orf62Q7Z3J2 963 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 ASPGQ86U10 573 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 AMIGO1Q86WK6 493 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 IQCF1Q8N6M8 205 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 SCAIQ8N9R8 606 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 POGLUT1Q8NBL1 392 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 PSD4Q8NDX1 1056 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 AP3S1Q92572 193 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 HTRA1Q92743 480 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 UFD1Q92890 307 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 GIMAP5Q96F15 307 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 OTUB1Q96FW1 271 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 C10orf90Q96M02 699 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 SLC46A1Q96NT5 459 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 SDHCQ99643 169 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 GPA33Q99795 319 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 GABRG3Q99928 467 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 VKORC1Q9BQB6 163 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 BARHL1Q9BZE3 327 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 MTHFD2LQ9H903 347 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 MOV10Q9HCE1 1003 aaKnown RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 PRDM8Q9NQV8 689 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 TXNL4BQ9NX01 149 aaKnown RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 FBXL12Q9NXK8 326 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 IL20Q9NYY1 176 aa7.26□□□□□ -1.25
CXCR4-201ENST00000241393 APOBEC3BQ9UH17 382 aaKnown RBP7.26□□□□□ -1.25
CXCR4-201ENST00000241393 GLOD5A6NK44 160 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 OR52A4PA6NMU1 304 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SLC30A4O14863 429 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SEC14L5O43304 696 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 CHST10O43529 356 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TNFSF14O43557 240 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 PRKRAO75569 313 aaKnown RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 DNTTP04053 509 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 CFIP05156 583 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TSPAN19P0C672 248 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SLC35G6P0C7Q6 338 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SMIM10L1P0DMW3 83 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF10P21506 573 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 GABRA5P31644 462 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ETV5P41161 510 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ETV1P50549 477 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 DGKEP52429 567 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ADPRHP54922 357 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TNFRSF17Q02223 184 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 HLXQ14774 488 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 KIR2DS3Q14952 304 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 LARS2Q15031 903 aaKnown RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 FBLN7Q53RD9 439 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 AADACL4Q5VUY2 407 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 MFSD12Q6NUT3 480 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TMEM184AQ6ZMB5 413 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF730Q6ZMV8 503 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 QSOX2Q6ZRP7 698 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 MBOAT2Q6ZWT7 520 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 VN1R4Q7Z5H5 301 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 WDR53Q7Z5U6 358 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 PEX5LQ8IYB4 626 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 LRRC25Q8N386 305 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms