RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 POLDIP3Q9BY77 421 aaKnown RBP12.09□□□□□ -0.47
SLIRP-201ENST00000238688 FBXO34Q9NWN3 711 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 CLN6Q9NWW5 311 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 PADI1Q9ULC6 663 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 SLC7A7Q9UM01 511 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 KCNMB2Q9Y691 235 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 CDH10Q9Y6N8 788 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 SPENQ96T58 3664 aaKnown RBP12.08□□□□□ -0.48
SLIRP-201ENST00000238688 UBR5O95071 2799 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-201ENST00000238688 H3BN98 237 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 K7EM74 188 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 BCAS1O75363 584 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-201ENST00000238688 REM1O75628 298 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 WISP1O95388 367 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 ICAM2P13598 275 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 ATP6V1B1P15313 513 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 GABRB1P18505 474 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 HTR2AP28223 471 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 ABCD3P28288 659 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 GIPRP48546 466 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 IDH2P48735 452 aaKnown RBP12.08□□□□□ -0.48
SLIRP-201ENST00000238688 MAP2K6P52564 334 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 CDK5Q00535 292 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 OCLNQ16625 522 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 MEP1AQ16819 746 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 CTU2Q2VPK5 515 aaKnown RBP12.08□□□□□ -0.48
SLIRP-201ENST00000238688 ZBED5Q49AG3 693 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 ALG10BQ5I7T1 473 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 ANKRD34AQ69YU3 496 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 LCN10Q6JVE6 187 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 TMEM81Q6P7N7 255 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 LINC00114Q6XXX2 140 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 ZAR1Q86SH2 424 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 SHISA5Q8N114 240 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 CYP4Z2PQ8N1L4 340 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 FAM26EQ8N5C1 309 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 ZNF614Q8N883 585 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 OR4C3Q8NH37 302 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 C9orf43Q8TAL5 461 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-201ENST00000238688 CNOT9Q92600 299 aaKnown RBP12.08□□□□□ -0.48
SLIRP-201ENST00000238688 TMCO6Q96DC7 493 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 GAL3ST4Q96RP7 486 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 BCL7BQ9BQE9 202 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 PRSS27Q9BQR3 290 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 TMEM43Q9BTV4 400 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 NDEL1Q9GZM8 345 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 RACGAP1Q9H0H5 632 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 ZNF700Q9H0M5 742 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 RNF6Q9Y252 685 aa12.08□□□□□ -0.48
SLIRP-201ENST00000238688 FLNCQ14315 2725 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 CENPVL1A0A0U1RR11 272 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 A0A1B0GWA3 101 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 OR2W5A6NFC9 320 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 CLCA1A8K7I4 914 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 A8MUA0 341 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 CDK2AP1O14519 115 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 FRS3O43559 492 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 CDC40O60508 579 aaKnown RBP eCLIP12.07□□□□□ -0.48
SLIRP-201ENST00000238688 WBP4O75554 376 aaKnown RBP12.07□□□□□ -0.48
SLIRP-201ENST00000238688 LYPD3O95274 346 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 LINGO3P0C6S8 592 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 ELK4P28324 431 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 FOLR3P41439 243 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 HTR3AP46098 478 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 RFX3P48380 749 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 NR0B1P51843 470 aaKnown RBP12.07□□□□□ -0.48
SLIRP-201ENST00000238688 EFNA3P52797 238 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 RPS18P62269 152 aaKnown RBP12.07□□□□□ -0.48
SLIRP-201ENST00000238688 SKP2Q13309 424 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 RNLSQ5VYX0 342 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 PLAG1Q6DJT9 500 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 ZNF620Q6ZNG0 422 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 LANCL3Q6ZV70 420 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 PTCHD4Q6ZW05 846 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 GPR141Q7Z602 305 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 CCDC71Q8IV32 467 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-201ENST00000238688 NRMQ8IXM6 262 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 ARMC10Q8N2F6 343 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 POGLUT1Q8NBL1 392 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 OR52L1Q8NGH7 329 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 M1APQ8TC57 530 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 RNF138Q8WVD3 245 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 MR1Q95460 341 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 DOCK10Q96BY6 2186 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 OMA1Q96E52 524 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 ARSGQ96EG1 525 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 ABHD17AQ96GS6 310 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 SECISBP2Q96T21 854 aaKnown RBP12.07□□□□□ -0.48
SLIRP-201ENST00000238688 WDR77Q9BQA1 342 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-201ENST00000238688 TBL1XR1Q9BZK7 514 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 ZNF71Q9NQZ8 489 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-201ENST00000238688 FKBP14Q9NWM8 211 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 ZNF223Q9UK11 482 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-201ENST00000238688 NPFFR2Q9Y5X5 522 aa12.07□□□□□ -0.48
SLIRP-201ENST00000238688 A0A087WUJ7 227 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 CLDN24A6NM45 220 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 C21orf140B9A014 251 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 GTPBP1O00178 669 aaKnown RBP12.06□□□□□ -0.48
SLIRP-201ENST00000238688 RGS10O43665 173 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 HCN1O60741 890 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms