RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PRICKLE2Q7Z3G6 844 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 OAFQ86UD1 273 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 RBM45Q8IUH3 476 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 LILRA2Q8N149 483 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 CIB1Q99828 191 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 TTTY12Q9BZ98 90 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 DNAJB12Q9NXW2 375 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 GMEB1Q9Y692 573 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 ANKRD33BA6NCL7 494 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 CCDC160A6NGH7 325 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 NME2P1O60361 137 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 FADS1O60427 444 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 NME2P22392 152 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 GSSP48637 474 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 SELENBP1Q13228 472 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 OR7A5Q15622 319 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 AQP11Q8NBQ7 271 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 PSMF1Q92530 271 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 RBM4BQ9BQ04 359 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 RBM4Q9BWF3 364 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 AMBRA1Q9C0C7 1298 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 EXOSC3Q9NQT5 275 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 ACER3Q9NUN7 267 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 TCRBV3S1A0A5B6 114 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 A8MVM7 634 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 J3KTA2 159 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 RCBTB2O95199 551 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 ADORA3P0DMS8 318 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 MAGEA5P43359 124 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 CARD18P57730 90 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 VLDLRP98155 873 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 EPS8Q12929 822 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 FOXF1Q12946 379 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 ZNF585AQ6P3V2 769 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 ATCAYQ86WG3 371 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 GRAMD2AQ8IUY3 354 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 NRMQ8IXM6 262 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 OR4K5Q8NGD3 323 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 ACOT11Q8WXI4 607 aaPredicted RBP10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 HGDQ93099 445 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 SLC6A5Q9Y345 797 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 CHCHD2Q9Y6H1 151 aaPredicted RBP10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 A0A1W2PQ72 361 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 RNF13O43567 381 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 CHP2O43745 196 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 FMO6PO60774 539 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 CLPSP04118 112 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 FUT5Q11128 374 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 RFX4Q33E94 735 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 P3H2Q8IVL5 708 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 GNPDA2Q8TDQ7 276 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 SLC35B4Q969S0 331 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 TBC1D23Q9NUY8 699 aa10.13□□□□□ -0.79
TNFAIP3-201ENST00000237289 PRAMEF27A3QJZ7 478 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 THRBP10828 461 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 PRG2P13727 222 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 GZMMP51124 257 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 RPS7P62081 194 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 EEF1A1P68104 462 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 NRF1Q16656 503 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 HBMQ6B0K9 141 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 H3F3CQ6NXT2 135 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 ARHGAP11AQ6P4F7 1023 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 SMAD5Q99717 465 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 MGAT4BQ9UQ53 548 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 CACNA1GO43497 2377 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 ATP6V1G2O95670 118 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 GUSBP08236 651 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 IGFBP5P24593 272 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 ADH7P40394 386 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 PMP22Q01453 160 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 LAPTM4AQ15012 233 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 ATP6AP1Q15904 470 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 ARSKQ6UWY0 536 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 GDF7Q7Z4P5 450 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 UTP4Q969X6 686 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 SLC38A2Q96QD8 506 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 IFT27Q9BW83 186 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 FANCFQ9NPI8 374 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 FBXL2Q9UKC9 423 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 LHX6Q9UPM6 363 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 C11orf98E9PRG8 122 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 IFNGP01579 166 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 RPS5P46782 204 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 TOP3AQ13472 1001 aaPredicted RBP10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 LY6DQ14210 128 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 PM20D2Q8IYS1 436 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 GHDCQ8N2G8 530 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 FAM86B1Q8N7N1 296 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 OR2M3Q8NG83 312 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 OR51A7Q8NH64 312 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 GPR119Q8TDV5 335 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 C1GALT1C1Q96EU7 318 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 NTNG1Q9Y2I2 539 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 PCDHGB6Q9Y5F9 930 aa10.12□□□□□ -0.79
TNFAIP3-201ENST00000237289 FIGNL2A6NMB9 653 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 M0R3G1 203 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 HCN1O60741 890 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 MAP2K6P52564 334 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 GALNT5Q7Z7M9 940 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms