RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 OR12D2P58182 307 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 Q3ZCU0 254 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 OAFQ86UD1 273 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 NR4A3Q92570 626 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 RAD51AP1Q96B01 352 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 CPNE2Q96FN4 548 aaPredicted RBP13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 PEX11GQ96HA9 241 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 MCHR1Q99705 422 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 IFT27Q9BW83 186 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 MFFQ9GZY8 342 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 ENKD1Q9H0I2 346 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 TM7SF3Q9NS93 570 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 MYEF2Q9P2K5 600 aaKnown RBP13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 FBXL4Q9UKA2 621 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 INSL5Q9Y5Q6 135 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 LRRN3E7EW58 273 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 CDC42EP2O14613 210 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 SOX30O94993 753 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 GUCA2BQ16661 112 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 AVPI1Q5T686 147 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 ZNF425Q6IV72 752 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 TIFAQ96CG3 184 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 CHFRQ96EP1 664 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 MRPL48Q96GC5 212 aaKnown RBP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 LRRN3Q9H3W5 708 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 LHX6Q9UPM6 363 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 IRGMA1A4Y4 181 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 SURF4O15260 269 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 AKR7A3O95154 331 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 GABRA1P14867 456 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 PTGFRP43088 359 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 MAGEB1P43366 347 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 GMFBP60983 142 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 SGCAQ16586 387 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 HYAL4Q2M3T9 481 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 FAM83HQ6ZRV2 1179 aaPredicted RBP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 JAZF1Q86VZ6 243 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 OR51A7Q8NH64 312 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 SGK3Q96BR1 496 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 ZC3H10Q96K80 434 aaKnown RBP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 C4orf36Q96KX1 117 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 CBLCQ9ULV8 474 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 CACNA1IQ9P0X4 2223 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 LCMT2O60294 686 aaKnown RBP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 PRAMEF2O60811 474 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 TBX6O95947 436 aaPredicted RBP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 CTSLP07711 333 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 ITGB8P26012 769 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 PTBP1P26599 531 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 BMP8BP34820 402 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 BSGP35613 385 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 PGDP52209 483 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 TGM3Q08188 693 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 TSPAN31Q12999 210 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 PDZK1IP1Q13113 114 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 TRAM2Q15035 370 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 ENTPD8Q5MY95 495 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 CST9Q5W186 159 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 MCATQ8IVS2 390 aaKnown RBP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 PUSL1Q8N0Z8 303 aaKnown RBP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 TNFAIP8L1Q8WVP5 186 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 UBE2E3Q969T4 207 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 OR1F2PQ96R84 312 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 TMEM185BQ9H7F4 350 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 ASH2LQ9UBL3 628 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 HS3ST2Q9Y278 367 aa13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 PCYT1BQ9Y5K3 369 aaPredicted RBP13.14□□□□□ -0.31
PCDHB3-201ENST00000231130 PLSCR5A0PG75 271 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 KIAA0355O15063 1070 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 CREBL2O60519 120 aaPredicted RBP13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 GKN3PP0CG01 181 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 NOS3P29474 1203 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 RORAP35398 523 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 GDNFP39905 211 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 IKZF1Q13422 519 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 SLC36A2Q495M3 483 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 LRRC37A5PQ49AS3 106 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 ACSM3Q53FZ2 586 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 AADACL4Q5VUY2 407 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 NUDT13Q86X67 352 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 STX12Q86Y82 276 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 CMIPQ8IY22 773 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 OR2T33Q8NG76 320 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 ACOT12Q8WYK0 555 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 TFGQ92734 400 aaPredicted RBP13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 ZNF689Q96CS4 500 aaPredicted RBP13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 IGSF21Q96ID5 467 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 AIF1LQ9BQI0 150 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 TREM1Q9NP99 234 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 ST3GAL3Q11203 375 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 RAB33AQ14088 237 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 PGGHGQ32M88 737 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 TP53I3Q53FA7 332 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms