RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PYCR1P32322 319 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 BSGP35613 385 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
SF1-201ENST00000227503 CLDN2P57739 230 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 RPS15P62841 145 aaKnown RBP13.05□□□□□ -0.32
SF1-201ENST00000227503 NDUFA9Q16795 377 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 BEX5Q5H9J7 111 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 PABPC1L2AQ5JQF8 200 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 CDC73Q6P1J9 531 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 CD300LDQ6UXZ3 194 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 SSX6Q7RTT6 188 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 HSD17B13Q7Z5P4 300 aaPredicted RBP13.05□□□□□ -0.32
SF1-201ENST00000227503 TMEM255BQ8WV15 326 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 SMPDL3AQ92484 453 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 PRRC1Q96M27 445 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 DPEP2Q9H4A9 486 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 EQTNQ9NQ60 294 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 ALPK2Q86TB3 2170 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 A0A1W2PS29 197 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 OR2M5A3KFT3 312 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 TBX19O60806 448 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 CBR1P16152 277 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 HTR1FP30939 366 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 GPR1P46091 355 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 GCGRP47871 477 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 HOXA1P49639 335 aaPredicted RBP13.05□□□□□ -0.32
SF1-201ENST00000227503 DEFB115Q30KQ5 88 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 METTL11BQ5VVY1 283 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 KHDRBS2Q5VWX1 349 aaKnown RBP13.05□□□□□ -0.32
SF1-201ENST00000227503 SLC22A10Q63ZE4 541 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 KIAA1211LQ6NV74 962 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 SLC16A13Q7RTY0 426 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 TMPRSS9Q7Z410 1059 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 CYB561A3Q8NBI2 242 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 OR5AR1Q8NGP9 310 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 OR2L2Q8NH16 312 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 HAVCR2Q8TDQ0 301 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 GHSRQ92847 366 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 RGMAQ96B86 450 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 NUS1Q96E22 293 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 OR52A5Q9H2C5 316 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 RHBGQ9H310 441 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 EDARQ9UNE0 448 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 PLCL2Q9UPR0 1127 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 MOKQ9UQ07 419 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 EXOGQ9Y2C4 368 aaKnown RBP13.05□□□□□ -0.32
SF1-201ENST00000227503 ARID1AO14497 2285 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 LRRK1Q38SD2 2015 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 SCN3AQ9NY46 2000 aa13.05□□□□□ -0.32
SF1-201ENST00000227503 TGM6O95932 706 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 HPP00738 406 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 MEOX2P50222 304 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 PCBP4P57723 403 aaKnown RBP13.04□□□□□ -0.32
SF1-201ENST00000227503 LASP1Q14847 261 aaKnown RBP13.04□□□□□ -0.32
SF1-201ENST00000227503 GUCA2BQ16661 112 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 PGGHGQ32M88 737 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 GLDNQ6ZMI3 551 aaPredicted RBP13.04□□□□□ -0.32
SF1-201ENST00000227503 PM20D2Q8IYS1 436 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 SMIM4Q8WVI0 70 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 NSMAFQ92636 917 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 C16orf58Q96GQ5 468 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 PPP1R16AQ96I34 528 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 MNTQ99583 582 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 TRIM36Q9NQ86 728 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 AHSPQ9NZD4 102 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 PURGQ9UJV8 347 aaKnown RBP13.04□□□□□ -0.32
SF1-201ENST00000227503 SLC6A5Q9Y345 797 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 KIAA1549LQ6ZVL6 1849 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 TRBV23-1A0A0A0MS06 115 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 GOSR2O14653 212 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 VSIG10L2P0DP72 767 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 PPP3CBP16298 524 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 OMPP47874 163 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 SORDQ00796 357 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 FGL1Q08830 312 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 FUT5Q11128 374 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 TSPAN31Q12999 210 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 HFEQ30201 348 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 ZNF765Q7L2R6 523 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 CDH26Q8IXH8 852 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 ARL14Q8N4G2 192 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 OR5M9Q8NGP3 310 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 ARRDC3Q96B67 414 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 MS4A8Q9BY19 250 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 LHX9Q9NQ69 397 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 ZCCHC3Q9NUD5 404 aaKnown RBP13.04□□□□□ -0.32
SF1-201ENST00000227503 ASF1AQ9Y294 204 aa13.04□□□□□ -0.32
SF1-201ENST00000227503 CREBL2O60519 120 aaPredicted RBP13.03□□□□□ -0.32
SF1-201ENST00000227503 RHOP08100 348 aa13.03□□□□□ -0.32
SF1-201ENST00000227503 GIPP09681 153 aaPredicted RBP13.03□□□□□ -0.32
SF1-201ENST00000227503 EPXP11678 715 aa13.03□□□□□ -0.32
SF1-201ENST00000227503 C6P13671 934 aa13.03□□□□□ -0.32
SF1-201ENST00000227503 GSTM3P21266 225 aa13.03□□□□□ -0.32
SF1-201ENST00000227503 NOS3P29474 1203 aa13.03□□□□□ -0.32
SF1-201ENST00000227503 FRKP42685 505 aaPredicted RBP13.03□□□□□ -0.32
SF1-201ENST00000227503 RBMS2Q15434 407 aaKnown RBP13.03□□□□□ -0.32
SF1-201ENST00000227503 TP53I3Q53FA7 332 aa13.03□□□□□ -0.32
SF1-201ENST00000227503 KCTD12Q96CX2 325 aaKnown RBP13.03□□□□□ -0.32
SF1-201ENST00000227503 ZNF514Q96K75 400 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms