RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 FXYD6P3P58550 94 aa22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 FOXK2Q01167 660 aa22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 TATDN3Q17R31 274 aa22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 ZNF528Q3MIS6 628 aa22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 PAMR1Q6UXH9 720 aa22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 KISS1RQ969F8 398 aaPredicted RBP22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 RNF31Q96EP0 1072 aa22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 TIMP4Q99727 224 aa22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 GON7Q9BXV9 100 aa22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 SIGLEC7Q9Y286 467 aa22.99■■□□□ 1.27
RUNDC3A-201ENST00000225441 RIIAD1A6NNX1 92 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 PIAS2O75928 621 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 SSTR4P31391 388 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 P2RY14Q15391 338 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 MAPK14Q16539 360 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 FCRL6Q6DN72 434 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 GRAMD2AQ8IUY3 354 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 SDR16C5Q8N3Y7 309 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 MS4A15Q8N5U1 240 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 TRIM63Q969Q1 353 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 RERGQ96A58 199 aaPredicted RBP22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 BPIFA2Q96DR5 249 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 ZFYVE21Q9BQ24 234 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 RANGRFQ9HD47 186 aaPredicted RBP22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 B3GAT2Q9NPZ5 323 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 PTP4A3O75365 173 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 DRD5P21918 477 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 ATP12AP54707 1039 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 POU6F2P78424 691 aaPredicted RBP22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 TRMT12Q53H54 448 aaKnown RBP22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 YIF1BQ5BJH7 314 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 PLCZ1Q86YW0 608 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 SLC37A3Q8NCC5 494 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 UBASH3BQ8TF42 649 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 DMRTB1Q96MA1 342 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 TEAD3Q99594 435 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 TMEM246Q9BRR3 403 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 ISG20L2Q9H9L3 353 aaKnown RBP22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 RPRD1BQ9NQG5 326 aaKnown RBP22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 ING3Q9NXR8 418 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 ACTR10Q9NZ32 417 aa22.98■■□□□ 1.27
RUNDC3A-201ENST00000225441 C2orf92A0A1B0GVN3 265 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 SMIM30A4D0T7 59 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 LMO7DNF2Z398 122 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 P2RX6O15547 441 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 BRINP1O60477 761 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 CTSVO60911 334 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 SDC3O75056 442 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 SP9P0CG40 484 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 PSKH1P11801 424 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 HK1P19367 917 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 ZCCHC10Q8TBK6 192 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 PIGKQ92643 395 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 MFRPQ9BY79 579 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 NPFFR2Q9Y5X5 522 aa22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 TDRD6O60522 2096 aaKnown RBP22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 ARHGEF17Q96PE2 2063 aaPredicted RBP22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 TP53BP1Q12888 1972 aaPredicted RBP22.97■■□□□ 1.27
RUNDC3A-201ENST00000225441 FAM183AA6NL82 134 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 CHP2O43745 196 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 IFNGP01579 166 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 ZNF3P17036 446 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 NPR2P20594 1047 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 WDR88Q6ZMY6 472 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 OAFQ86UD1 273 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 TMEM99Q8N816 258 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 OR4C6Q8NH72 309 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 PTP4A1Q93096 173 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 IFT27Q9BW83 186 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 ADAP2Q9NPF8 381 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 UCKL1Q9NWZ5 548 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 PAQR5Q9NXK6 330 aaPredicted RBP22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 EXTL2Q9UBQ6 330 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 ALG5Q9Y673 324 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 MUC3AQ02505 3323 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 ANKRD61A6NGH8 418 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 NCR1O76036 304 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 NKX2-2O95096 273 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 SERPINA3P01011 423 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 C1QBP02746 253 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 SBK2P0C263 348 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 PRG2P13727 222 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 ELK1P19419 428 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 SLC2A5P22732 501 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 HHEXQ03014 270 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 PRICKLE4Q2TBC4 344 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 IDNKQ5T6J7 187 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 PEAR1Q5VY43 1037 aaPredicted RBP22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 RTL4Q6ZR62 310 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 ZNF438Q7Z4V0 828 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 PXKQ7Z7A4 578 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 OR4N5Q8IXE1 308 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 ZBTB44Q8NCP5 570 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 ZFAND1Q8TCF1 268 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 CTHRC1Q96CG8 243 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 TRIM2Q9C040 744 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 RABL2AQ9UBK7 228 aaPredicted RBP22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 RABL2BQ9UNT1 228 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 NOX1Q9Y5S8 564 aa22.96■■□□□ 1.27
RUNDC3A-201ENST00000225441 CYR61O00622 381 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms