RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 EXD3Q8N9H8 876 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 FAM98AQ8NCA5 519 aaKnown RBP12.72□□□□□ -0.37
SEC61B-201ENST00000223641 SLC7A13Q8TCU3 470 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 DTNBP1Q96EV8 351 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 NRBF2Q96F24 287 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 ARHGAP9Q9BRR9 750 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 ZDHHC11Q9H8X9 412 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 REEP1Q9H902 201 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 RPS6KB2Q9UBS0 482 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 OSGIN1Q9UJX0 560 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 SLC7A7Q9UM01 511 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 LHX6Q9UPM6 363 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 VDAC3Q9Y277 283 aa12.72□□□□□ -0.37
SEC61B-201ENST00000223641 A0A087WUU8 490 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 TRBV4-1A0A0J9YWV2 114 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 TNFRSF11BO00300 401 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 GNGT2O14610 69 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 CASQ2O14958 399 aaPredicted RBP12.71□□□□□ -0.37
SEC61B-201ENST00000223641 EFNA2O43921 213 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 BAG2O95816 211 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 PNMTP11086 282 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 ZNF17P17021 662 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 DNAJA1P31689 397 aaKnown RBP12.71□□□□□ -0.37
SEC61B-201ENST00000223641 RBM34P42696 430 aaKnown RBP12.71□□□□□ -0.37
SEC61B-201ENST00000223641 POLR2HP52434 150 aaKnown RBP12.71□□□□□ -0.37
SEC61B-201ENST00000223641 IST1P53990 364 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 B3GALT5-AS1P59052 145 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 FOXF1Q12946 379 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 RNFT1Q5M7Z0 435 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 C19orf48Q6RUI8 117 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 SLC22A16Q86VW1 577 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 FAM83FQ8NEG4 500 aaPredicted RBP12.71□□□□□ -0.37
SEC61B-201ENST00000223641 PNPLA2Q96AD5 504 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 ALPK1Q96QP1 1244 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 PSD2Q9BQI7 771 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 SEMA6AQ9H2E6 1030 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 ACKR4Q9NPB9 350 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 B4GALT7Q9UBV7 327 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 SAMHD1Q9Y3Z3 626 aaKnown RBP12.71□□□□□ -0.37
SEC61B-201ENST00000223641 MAP1BP46821 2468 aaKnown RBP12.71□□□□□ -0.37
SEC61B-201ENST00000223641 PKD1L2Q7Z442 2459 aa12.71□□□□□ -0.37
SEC61B-201ENST00000223641 SPENQ96T58 3664 aaKnown RBP12.71□□□□□ -0.38
SEC61B-201ENST00000223641 BOD1L1Q8NFC6 3051 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 TPRP12270 2363 aaKnown RBP12.7□□□□□ -0.38
SEC61B-201ENST00000223641 SH3PXD2BA1X283 911 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 FAM47E-STBD1D6RA91 191 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 RASAL1O95294 804 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 IGF2P01344 180 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 HK1P19367 917 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 FPR1P21462 350 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 GDF1P27539 372 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 RFC3P40938 356 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 MAGEA5P43359 124 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 PPIAP62937 165 aaKnown RBP12.7□□□□□ -0.38
SEC61B-201ENST00000223641 FOXK1P85037 733 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 PLGLB1Q02325 96 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 EGR4Q05215 589 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 SLC34A1Q06495 639 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 MERTKQ12866 999 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 PPP1R8Q12972 351 aaKnown RBP12.7□□□□□ -0.38
SEC61B-201ENST00000223641 SEC23BQ15437 767 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 MICAQ29983 383 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 EXOC3L2Q2M3D2 409 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 DCST1Q5T197 706 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 ZNF770Q6IQ21 691 aaPredicted RBP12.7□□□□□ -0.38
SEC61B-201ENST00000223641 PODNL1Q6PEZ8 512 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 SHQ1Q6PI26 577 aaKnown RBP12.7□□□□□ -0.38
SEC61B-201ENST00000223641 RNF113BQ8IZP6 322 aaKnown RBP12.7□□□□□ -0.38
SEC61B-201ENST00000223641 FAM109AQ8N4B1 249 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 Q8NA96 180 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 OR52J3Q8NH60 311 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 OR5K1Q8NHB7 308 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 ACOT11Q8WXI4 607 aaPredicted RBP12.7□□□□□ -0.38
SEC61B-201ENST00000223641 WBP1Q96G27 269 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 HS6ST2Q96MM7 605 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 TAAR6Q96RI8 345 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 TMEM43Q9BTV4 400 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 SLC19A3Q9BZV2 496 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 ZNF71Q9NQZ8 489 aaPredicted RBP12.7□□□□□ -0.38
SEC61B-201ENST00000223641 DKKL1Q9UK85 242 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 U3KQV3 271 aa12.7□□□□□ -0.38
SEC61B-201ENST00000223641 IGKV1D-42A0A075B6H8 117 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 TMED7-TICAM2A0A0A6YYA0 188 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 OR2M5A3KFT3 312 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 ARRDC5A6NEK1 342 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 ERVH48-1M5A8F1 160 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 ACOT7O00154 380 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 ZNF208O43345 1280 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 NPIPB7O75200 414 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 SFTPCP11686 197 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 FKBP2P26885 142 aaKnown RBP12.69□□□□□ -0.38
SEC61B-201ENST00000223641 ELK4P28324 431 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 GFRA1P56159 465 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEC61B-201ENST00000223641 PMP22Q01453 160 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 NADK2Q4G0N4 442 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 PCSK4Q6UW60 755 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 EPHX4Q8IUS5 362 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 SVOPLQ8N434 492 aa12.69□□□□□ -0.38
SEC61B-201ENST00000223641 LINC00471Q8N535 108 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms