RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NPIPA7E9PJI5 369 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 FLRT2O43155 660 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 GSTZ1O43708 216 aaPredicted RBP12.28□□□□□ -0.44
SRP54-201ENST00000216774 FGF17O60258 216 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 GPR75O95800 540 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 CD1AP06126 327 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 NPIPA8P0DM63 369 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 UGT2B7P16662 529 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 NT5EP21589 574 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 MAT2AP31153 395 aaKnown RBP12.28□□□□□ -0.44
SRP54-201ENST00000216774 SRP9P49458 86 aaKnown RBP12.28□□□□□ -0.44
SRP54-201ENST00000216774 ARPC4P59998 168 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 PLAURQ03405 335 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 PRICKLE4Q2TBC4 344 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 ZBTB37Q5TC79 503 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 FCRL6Q6DN72 434 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 FIGNL1Q6PIW4 674 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 YAF2Q8IY57 180 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 POMGNT2Q8NAT1 580 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 CYB561A3Q8NBI2 242 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 PEX11GQ96HA9 241 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 MED30Q96HR3 178 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 CITED4Q96RK1 184 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 MYADMQ96S97 322 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 MKRN2Q9H000 416 aaKnown RBP12.28□□□□□ -0.44
SRP54-201ENST00000216774 LRRN3Q9H3W5 708 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 IL21RQ9HBE5 538 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 MCCC2Q9HCC0 563 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 ZFP64Q9NPA5 681 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 TMEM74BQ9NUR3 256 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 MAT2BQ9NZL9 334 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 TEKT2Q9UIF3 430 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 CAMK2AQ9UQM7 478 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 TBC1D3DA0A087WVF3 549 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 TBC1D3IA0A087WXS9 549 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 TBC1D3LB9A6J9 549 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 CTDSPLO15194 276 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 GATBO75879 557 aaKnown RBP12.27□□□□□ -0.44
SRP54-201ENST00000216774 GUSBP08236 651 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 UCHL1P09936 223 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 OR2T7P0C7T2 308 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 TBC1D3HP0C7X1 549 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 ATF1P18846 271 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 GABRA3P34903 492 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 GBX2P52951 348 aaPredicted RBP12.27□□□□□ -0.44
SRP54-201ENST00000216774 MGAT2Q10469 447 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 GGTLC2Q14390 218 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 SLC22A10Q63ZE4 541 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 TBC1D3CQ6IPX1 549 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 FIGLAQ6QHK4 219 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 SSX6Q7RTT6 188 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 GRAMD2AQ8IUY3 354 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 SIAH3Q8IW03 269 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 CMIPQ8IY22 773 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 TBC1D3Q8IZP1 549 aaPredicted RBP12.27□□□□□ -0.44
SRP54-201ENST00000216774 ZNF655Q8N720 491 aaPredicted RBP12.27□□□□□ -0.44
SRP54-201ENST00000216774 OR5H6Q8NGV6 325 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 OR2T27Q8NH04 317 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 GRHL3Q8TE85 626 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 ZNF431Q8TF32 576 aaPredicted RBP12.27□□□□□ -0.44
SRP54-201ENST00000216774 THAP4Q8WY91 577 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 OR1E3Q8WZA6 343 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 TNFRSF13CQ96RJ3 184 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 CACNG6Q9BXT2 260 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 TRIM2Q9C040 744 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 ACTR6Q9GZN1 396 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 SLCO1C1Q9NYB5 712 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 FBXL4Q9UKA2 621 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 C2orf16Q68DN1 1984 aa12.27□□□□□ -0.44
SRP54-201ENST00000216774 GOLGA4Q13439 2230 aaKnown RBP12.27□□□□□ -0.45
SRP54-201ENST00000216774 SCN3AQ9NY46 2000 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 A0A1B0GWA3 101 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 A0A1W2PRG6 482 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 CYR61O00622 381 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 SLC31A1O15431 190 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 LDB3O75112 727 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 CD3GP09693 182 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 AK4P27144 223 aaPredicted RBP12.27□□□□□ -0.45
SRP54-201ENST00000216774 GIFP27352 417 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 NUDT1P36639 197 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 GDI2P50395 445 aaKnown RBP12.27□□□□□ -0.45
SRP54-201ENST00000216774 PER3P56645 1201 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 DBPQ10586 325 aaPredicted RBP12.27□□□□□ -0.45
SRP54-201ENST00000216774 IKZF1Q13422 519 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 DYRK1AQ13627 763 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 FHL1Q13642 323 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 CDK5R1Q15078 307 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 CEP78Q5JTW2 689 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 OVCH1Q7RTY7 1134 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 LUZP2Q86TE4 346 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 ASB12Q8WXK4 309 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 HOXB13Q92826 284 aaPredicted RBP12.27□□□□□ -0.45
SRP54-201ENST00000216774 BADQ92934 168 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 HGDQ93099 445 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 RERGQ96A58 199 aaPredicted RBP12.27□□□□□ -0.45
SRP54-201ENST00000216774 CTHRC1Q96CG8 243 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 CNN2Q99439 309 aaKnown RBP12.27□□□□□ -0.45
SRP54-201ENST00000216774 ZFYVE21Q9BQ24 234 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 BRD7Q9NPI1 651 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms