RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 METTL21AQ8WXB1 218 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 PLGRKTQ9HBL7 147 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 CHCHD3Q9NX63 227 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 OSGIN1Q9UJX0 560 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 IGKV1D-42A0A075B6H8 117 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 OR6C70A6NIJ9 312 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 MYL12BO14950 172 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 CPNE3O75131 537 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 SLC2A10O95528 541 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 IGHA1P01876 353 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 HSMCR30P0CW71 290 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 PEPDP12955 493 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 ETV5P41161 510 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 SERPINB10P48595 397 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 ETV1P50549 477 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 EMP2P54851 167 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 MLLT10P55197 1068 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 LSM3P62310 102 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 SSX1Q16384 188 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 TSTQ16762 297 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 MRPL14Q6P1L8 145 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 CBLN3Q6UW01 205 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 USP43Q70EL4 1123 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 CPOQ8IVL8 374 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 ZHX1-C8orf76Q96EF9 292 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 TNFRSF13CQ96RJ3 184 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 SPSB2Q99619 263 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 IFT27Q9BW83 186 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 GTPBP2Q9BX10 602 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 NRSN2Q9GZP1 204 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 ADAM19Q9H013 955 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 WDR54Q9H977 334 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 H2AFY2Q9P0M6 372 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 IL20RAQ9UHF4 553 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 CARD8Q9Y2G2 431 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 PCDHGA5Q9Y5G8 931 aa13.1□□□□□ -0.31
RTFDC1-201ENST00000023939 TRAV27A0A087WT01 109 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 MEN1O00255 615 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 FADS1O60427 444 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 OR7A10O76100 309 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 NDUFB2O95178 105 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 ACP1P24666 158 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 SLC1A3P43003 542 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 GRK6P43250 576 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 ENTPD1P49961 510 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 WNT4P56705 351 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 MC2RQ01718 297 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 ISXQ2M1V0 245 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 ZNF829Q3KNS6 432 aaPredicted RBP13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 ZNF362Q5T0B9 420 aaPredicted RBP13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 ARHGAP11AQ6P4F7 1023 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 SHISA6Q6ZSJ9 500 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 MEPCEQ7L2J0 689 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 CROCCP3Q8IVE0 287 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 PRR22Q8IZ63 422 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 GATSQ8NAP1 163 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 PSD4Q8NDX1 1056 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 KBTBD8Q8NFY9 601 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 OR51A7Q8NH64 312 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 WDR77Q9BQA1 342 aaPredicted RBP13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 DCSTAMPQ9H295 470 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 APMAPQ9HDC9 416 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 FBXO8Q9NRD0 319 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 NXT1Q9UKK6 140 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 ZNF337Q9Y3M9 751 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 A3GALT2U3KPV4 340 aa13.09□□□□□ -0.31
RTFDC1-201ENST00000023939 CDC14CA4D256 554 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 ELOA3DA6NLF2 546 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 RIIAD1A6NNX1 92 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 J3QRE1 110 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 LIMS3P0CW19 117 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 LIMS4P0CW20 117 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 NAGAP17050 411 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 HK1P19367 917 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 MPLP40238 635 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF117Q03924 483 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 EFR3AQ14156 821 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 ELOA3BQ3SY89 546 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 ANKDD1AQ495B1 522 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 FAAH2Q6GMR7 532 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 PLBD1Q6P4A8 553 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 CACTIN-AS1Q8N1I8 211 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 ZNF485Q8NCK3 441 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 BBS1Q8NFJ9 593 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 ELOA3Q8NG57 546 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 OR51E2Q9H255 320 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 NDUFB11Q9NX14 153 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 SEC14L4Q9UDX3 406 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 C19orf25Q9UFG5 118 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 CHRNA9Q9UGM1 479 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 A0A0C4DFX4 3053 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 IGHV3-20A0A0C4DH32 117 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 ARPC3O15145 178 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 NDUFB5O43674 189 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 NADKO95544 446 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 LDOC1O95751 146 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 IFNGP01579 166 aa13.08□□□□□ -0.32
RTFDC1-201ENST00000023939 CPEP16870 476 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms