RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PCDHGB6Q9Y5F9 930 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 PCDHGB1Q9Y5G3 927 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 PCDHGA6Q9Y5G7 932 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 NUP210LQ5VU65 1888 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 SEC16AO15027 2179 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 DPPA5A6NC42 116 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 NPIPB9F8W1W9 429 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 J3KTA2 159 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 ZNF701M0R085 212 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-234ENST00000642041 MEN1O00255 615 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 SCDO00767 359 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 ALOX12BO75342 701 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 SEC24DO94855 1032 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-234ENST00000642041 GASTP01350 101 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 CRHBPP24387 322 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 EEF1B2P24534 225 aaKnown RBP15.78■□□□□ 0.12
PHGDH-234ENST00000642041 PPP1R8Q12972 351 aaKnown RBP15.78■□□□□ 0.12
PHGDH-234ENST00000642041 EFR3AQ14156 821 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 NPTX1Q15818 432 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 MRPL2Q5T653 305 aaKnown RBP15.78■□□□□ 0.12
PHGDH-234ENST00000642041 PODNL1Q6PEZ8 512 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 CASP12Q6UXS9 341 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 MBOAT2Q6ZWT7 520 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 NUP54Q7Z3B4 507 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 GALNT5Q7Z7M9 940 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 METTL27Q8N6F8 245 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-234ENST00000642041 BCORP1Q8N888 145 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 OR4K5Q8NGD3 323 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 ZNF721Q8TF20 911 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 MYDGFQ969H8 173 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 VMP1Q96GC9 406 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 RBCK1Q9BYM8 510 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 SLC19A3Q9BZV2 496 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 C12orf10Q9HB07 376 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 LUZP4Q9P127 313 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 RPS6KB2Q9UBS0 482 aa15.78■□□□□ 0.12
PHGDH-234ENST00000642041 ZAR1LA6NP61 321 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 TGFBR3LH3BV60 316 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 HMGN1P05114 100 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 TBXA2RP21731 343 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 FPR3P25089 353 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 TMED10P49755 219 aaKnown RBP15.77■□□□□ 0.12
PHGDH-234ENST00000642041 GPR143P51810 404 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 SMSP52788 366 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 CD47Q08722 323 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 RAPSNQ13702 412 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 MAD2L1BPQ15013 274 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-234ENST00000642041 ANKDD1AQ495B1 522 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 VWA2Q5GFL6 755 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 SLC25A30Q5SVS4 291 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 C1orf189Q5VU69 101 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 ZNF385CQ66K41 422 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-234ENST00000642041 ULK3Q6PHR2 472 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 FIGNL1Q6PIW4 674 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 RASSF6Q6ZTQ3 369 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 DND1Q8IYX4 353 aaKnown RBP15.77■□□□□ 0.12
PHGDH-234ENST00000642041 SLC15A4Q8N697 577 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 B3GNT7Q8NFL0 401 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 OR8J1Q8NGP2 316 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 FCGR1BQ92637 280 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 MFRPQ9BY79 579 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 ULBP3Q9BZM4 244 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 OR8D2Q9GZM6 311 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 MED17Q9NVC6 651 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 CLN6Q9NWW5 311 aa15.77■□□□□ 0.12
PHGDH-234ENST00000642041 DCHS2Q6V1P9 2916 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 TRBV4-1A0A0J9YWV2 114 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 ANKUB1A6NFN9 424 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 SERINC4A6NH21 518 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 SAGE2PA6NJ88 616 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 CHP2O43745 196 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 EIF4E2O60573 245 aaKnown RBP15.76■□□□□ 0.11
PHGDH-234ENST00000642041 PPM1BO75688 479 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 TIAF1O95411 115 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 EPPINO95925 133 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 TFAP2AP05549 437 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 PNMTP11086 282 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 JUNBP17275 347 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-234ENST00000642041 IL12BP29460 328 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 SNRPGP62308 76 aaKnown RBP15.76■□□□□ 0.11
PHGDH-234ENST00000642041 PTGES3Q15185 160 aaKnown RBP15.76■□□□□ 0.11
PHGDH-234ENST00000642041 PRAMEF17Q5VTA0 474 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 PGBD2Q6P3X8 592 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 TMEM205Q6UW68 189 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 HSDL2Q6YN16 418 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 DGAT2L6Q6ZPD8 337 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 CYP4Z2PQ8N1L4 340 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 CLIP4Q8N3C7 705 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 OR4D11Q8NGI4 311 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 RHOXF1Q8NHV9 184 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 THAP4Q8WY91 577 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 ADIPOR1Q96A54 375 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 PNPLA2Q96AD5 504 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 ZG16BQ96DA0 208 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 SLC38A2Q96QD8 506 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 ITPAQ9BY32 194 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 NDEL1Q9GZM8 345 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 ITGB1BP2Q9UKP3 347 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 BAIAP2Q9UQB8 552 aa15.76■□□□□ 0.11
PHGDH-234ENST00000642041 MED31Q9Y3C7 131 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms