RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	TMEM45A	Q9NWC5	275 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	ZNF446	Q9NWS9	450 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	THUMPD1	Q9NXG2	353 aa	Known RBP	13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	CALML5	Q9NZT1	146 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	CCDC167	Q9P0B6	97 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	AKAP9	Q99996	3911 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	OTOG	Q6ZRI0	2925 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939		A0A096LPI6	279 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	CLDN24	A6NM45	220 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	NR5A2	O00482	541 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	PLG	P00747	810 aa	Predicted RBP	13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	CD8B	P10966	210 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	RPS4Y1	P22090	263 aa	Known RBP	13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	CPOX	P36551	454 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	DSTN	P60981	165 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	MERTK	Q12866	999 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	GNA13	Q14344	377 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	SQLE	Q14534	574 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	MAPK11	Q15759	364 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	AGK	Q53H12	422 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	C3orf33	Q6P1S2	294 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	PEX5L	Q8IYB4	626 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	ARFGAP2	Q8N6H7	521 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	ATP6V1C2	Q8NEY4	427 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	LINC01560	Q8TB33	94 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	SLC38A5	Q8WUX1	472 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	WDR60	Q8WVS4	1066 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	CPNE4	Q96A23	557 aa	Predicted RBP	13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	SIKE1	Q9BRV8	207 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	RAD21L1	Q9H4I0	556 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	NPHS2	Q9NP85	383 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	GLRX2	Q9NS18	164 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	PROCR	Q9UNN8	238 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	EMC9	Q9Y3B6	208 aa		13.46	□□□□□ -0.25
PHGDH-231	ENST00000641939	TMEM247	A6NEH6	219 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	CLIC1	O00299	241 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	SS18L1	O75177	396 aa	Predicted RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	CTAG2	O75638	210 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	CGA	P01215	116 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	BCHE	P06276	602 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	DBI	P07108	87 aa	Known RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	TFPT	P0C1Z6	253 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	PABPC4L	P0CB38	370 aa	Known RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	EPX	P11678	715 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	IL7R	P16871	459 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	HOXB9	P17482	250 aa	Predicted RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	NCF2	P19878	526 aa	Predicted RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	SLC7A1	P30825	629 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	RYK	P34925	604 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	PCYT1A	P49585	367 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	CTBP2	P56545	445 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	PLAUR	Q03405	335 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	RGN	Q15493	299 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZNF239	Q16600	458 aa	Known RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	GTF2IRD2B	Q6EKJ0	949 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	PLEKHM3	Q6ZWE6	761 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	GTF2IRD2	Q86UP8	949 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZNF563	Q8TA94	476 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	CNOT9	Q92600	299 aa	Known RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	REXO5	Q96IC2	774 aa	Known RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	SRXN1	Q9BYN0	137 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	RABEP2	Q9H5N1	569 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	COQ10B	Q9H8M1	238 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	SLC52A3	Q9NQ40	469 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	SERINC1	Q9NRX5	453 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	DNAJB12	Q9NXW2	375 aa	Known RBP	13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	DCTN4	Q9UJW0	460 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	CLEC4A	Q9UMR7	237 aa		13.45	□□□□□ -0.26
PHGDH-231	ENST00000641939	DSPP	Q9NZW4	1301 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	UQCRHL	A0A096LP55	91 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939		A6NNC1	897 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	NID1	P14543	1247 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	CD79B	P40259	229 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	APOBEC1	P41238	236 aa	Known RBP	13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	CRISP3	P54108	245 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	FADD	Q13158	208 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	DAZAP2	Q15038	168 aa	Predicted RBP	13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	LRIF1	Q5T3J3	769 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	MRPL2	Q5T653	305 aa	Known RBP	13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	OR6K3	Q8NGY3	331 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	ROBO4	Q8WZ75	1007 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	TMEM19	Q96HH6	336 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	DACH2	Q96NX9	599 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	SLC39A3	Q9BRY0	314 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	ELOVL5	Q9NYP7	299 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	SLAMF8	Q9P0V8	285 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939	TRIM33	Q9UPN9	1127 aa		13.44	□□□□□ -0.26
PHGDH-231	ENST00000641939		A0A0G2JND7	137 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939		A0A0G2JPF8	293 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939		A0A1W2PNR3	127 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939		A0A1W2PP18	115 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	FAM221A	A4D161	298 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	SH3D21	A4FU49	640 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	ENO4	A6NNW6	628 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	HNRNPCL2	B2RXH8	293 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	HNRNPCL3	B7ZW38	293 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	HNRNPCL1	O60812	293 aa	Known RBP	13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms