RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CORO2BQ9UQ03 480 aa23.99■■□□□ 1.43
VEGFA-231ENST00000640499 HCFC1P51610 2035 aa23.99■■□□□ 1.43
VEGFA-231ENST00000640499 ADGRG4Q8IZF6 3080 aa23.99■■□□□ 1.43
VEGFA-231ENST00000640499 FAM90A27PA6NNH2 459 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 HSPB2A8KAH6 182 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 MRASO14807 208 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 CCDC22O60826 627 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 RCBTB2O95199 551 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 PGCP20142 388 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 ELK4P28324 431 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 ACAA2P42765 397 aaKnown RBP23.98■■□□□ 1.43
VEGFA-231ENST00000640499 CYLC2Q14093 348 aaPredicted RBP23.98■■□□□ 1.43
VEGFA-231ENST00000640499 GNA13Q14344 377 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 HSPB2Q16082 182 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 RABL3Q5HYI8 236 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 SP5Q6BEB4 398 aaPredicted RBP23.98■■□□□ 1.43
VEGFA-231ENST00000640499 REEP3Q6NUK4 255 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 NET1Q7Z628 596 aaPredicted RBP23.98■■□□□ 1.43
VEGFA-231ENST00000640499 PIGWQ7Z7B1 504 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 ST8SIA1Q92185 356 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 PINK1Q9BXM7 581 aa23.98■■□□□ 1.43
VEGFA-231ENST00000640499 INTS1Q8N201 2190 aaKnown RBP23.98■■□□□ 1.43
VEGFA-231ENST00000640499 TMEM247A6NEH6 219 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 BBIP1A8MTZ0 92 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 EIF1AYO14602 144 aaKnown RBP23.97■■□□□ 1.43
VEGFA-231ENST00000640499 TNFSF11O14788 317 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 IL2RAP01589 272 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 PABPC4LP0CB38 370 aaKnown RBP23.97■■□□□ 1.43
VEGFA-231ENST00000640499 ETS2P15036 469 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 SLC6A8P48029 635 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 AGFG1P52594 562 aaKnown RBP23.97■■□□□ 1.43
VEGFA-231ENST00000640499 EEFSECP57772 596 aaKnown RBP23.97■■□□□ 1.43
VEGFA-231ENST00000640499 SCARB2Q14108 478 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 MAPRE2Q15555 327 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 LIN52Q52LA3 116 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 RNF220Q5VTB9 566 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 PLEKHM3Q6ZWE6 761 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 CPLX4Q7Z7G2 160 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 GRAMD2AQ8IUY3 354 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 ZZZ3Q8IYH5 903 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 OR10D3Q8NH80 312 aa23.97■■□□□ 1.43
VEGFA-231ENST00000640499 NPDC1Q9NQX5 325 aaPredicted RBP23.97■■□□□ 1.43
VEGFA-231ENST00000640499 CRYBG3Q68DQ2 2970 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 GKN3PP0CG01 181 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 PRG2P13727 222 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 IDH2P48735 452 aaKnown RBP23.96■■□□□ 1.43
VEGFA-231ENST00000640499 EPS8Q12929 822 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 MMEL1Q495T6 779 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 ACBD4Q8NC06 268 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 ATP6V1C2Q8NEY4 427 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 OR10A6Q8NH74 314 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 RP9Q8TA86 221 aaKnown RBP23.96■■□□□ 1.43
VEGFA-231ENST00000640499 FNDC9Q8TBE3 224 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 RCN3Q96D15 328 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 KLHL15Q96M94 604 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 TM9SF2Q99805 663 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 SPATA9Q9BWV2 254 aa23.96■■□□□ 1.43
VEGFA-231ENST00000640499 C5orf58C9J3I9 102 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 TPST1O60507 370 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 AQP8O94778 261 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 COX4I1P13073 169 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 CTSSP25774 331 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 SFTPDP35247 375 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 EIF1AXP47813 144 aaKnown RBP23.95■■□□□ 1.42
VEGFA-231ENST00000640499 PCBP3P57721 371 aaKnown RBP23.95■■□□□ 1.42
VEGFA-231ENST00000640499 PON3Q15166 354 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 TMEM176BQ3YBM2 270 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-231ENST00000640499 ZNF311Q5JNZ3 666 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 ZNF787Q6DD87 383 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 ESPNLQ6ZVH7 1005 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 SERPINA11Q86U17 422 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 CALHM3Q86XJ0 350 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 OR2V1Q8NHB1 315 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 INTS12Q96CB8 462 aaKnown RBP23.95■■□□□ 1.42
VEGFA-231ENST00000640499 COQ10BQ9H8M1 238 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 IFT52Q9Y366 437 aa23.95■■□□□ 1.42
VEGFA-231ENST00000640499 CFAP73A6NFT4 308 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 SLC22A20A6NK97 555 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 FAAHO00519 579 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 CXCL13O43927 109 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 NPPAP01160 153 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 TMIGD3P0DMS9 266 aaPredicted RBP23.94■■□□□ 1.42
VEGFA-231ENST00000640499 AQP1P29972 269 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 MERTKQ12866 999 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 LARS2Q15031 903 aaKnown RBP23.94■■□□□ 1.42
VEGFA-231ENST00000640499 CHMP1BQ7LBR1 199 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 ADGRG3Q86Y34 549 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 GCNT2Q8N0V5 402 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 OR8J3Q8NGG0 315 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 ZNF563Q8TA94 476 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 TMEM234Q8WY98 164 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 SRXN1Q9BYN0 137 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 NSRP1Q9H0G5 558 aaKnown RBP23.94■■□□□ 1.42
VEGFA-231ENST00000640499 CTPS2Q9NRF8 586 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 ZNF629Q9UEG4 869 aaPredicted RBP23.94■■□□□ 1.42
VEGFA-231ENST00000640499 ZNF232Q9UNY5 417 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 USP22Q9UPT9 525 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 ZNF175Q9Y473 711 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 CELSR2Q9HCU4 2923 aa23.94■■□□□ 1.42
VEGFA-231ENST00000640499 TNFSF13O75888 250 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms