RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 LHX6Q9UPM6 363 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 F10P00742 488 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 OSMP13725 252 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 DAOAP59103 153 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 JOSD2Q8TAC2 188 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 ZNF596Q8TC21 504 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 EMID1Q96A84 441 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 ARHGAP39Q9C0H5 1083 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 SYNPO2LQ9H987 977 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 MRPL15Q9P015 296 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 KIAA1324LA8MWY0 1029 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 NDUFB2O95178 105 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 HYAL2Q12891 473 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 ARHGAP11BQ3KRB8 267 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 LBHQ53QV2 105 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 FAM185AQ8N0U4 392 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 RELL2Q8NC24 303 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 OR56B1Q8NGI3 324 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 SRRQ9GZT4 340 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 NKX1-2Q9UD57 310 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 COPS3Q9UNS2 423 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 SCN4AP35499 1836 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 A8MU76 341 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 STSP08842 583 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 CAMK2BQ13554 666 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 PLCXD3Q63HM9 321 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 LINC00116Q8NCU8 138 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 ST6GALNAC4Q9H4F1 302 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 NFAT5O94916 1531 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 TMEM212A6NML5 194 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 HOXA11P31270 313 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 DHPSP49366 369 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 ATP1B3P54709 279 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 SYT6Q5T7P8 510 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 SMIM28A0A1B0GU29 152 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 GIFP27352 417 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 SNU13P55769 128 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 IL20RBQ6UXL0 311 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 MCATQ8IVS2 390 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 GLB1L2Q8IW92 636 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 BLNKQ8WV28 456 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 RBM24Q9BX46 236 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 SACM1LQ9NTJ5 587 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 V9GY05 133 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 ALPK2Q86TB3 2170 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 BAXQ07812 192 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 DESI1Q6ICB0 168 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 CPXM2Q8N436 756 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 HSD17B14Q9BPX1 270 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 SLAMF7Q9NQ25 335 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 MCM3APO60318 1980 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 TNFSF12O43508 249 aa18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 TIPARPQ7Z3E1 657 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-257ENST00000638009 TISP43B9A030 160 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 ARPC1BO15143 372 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 UBE2G1P62253 170 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 NSDHLQ15738 373 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 C2orf27AQ580R0 203 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 CD200R1Q8TD46 325 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 ASB13Q8WXK3 278 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 SMOC2Q9H3U7 446 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 OR2M7Q8NG81 312 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 SLC25A21Q9BQT8 299 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 PIGQQ9BRB3 760 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 NOX3Q9HBY0 568 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 ENPP5Q9UJA9 477 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 GLOD5A6NK44 160 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 CXADRP78310 365 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 RBPJQ06330 500 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 RNF212Q495C1 297 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 FAM155AB1AL88 458 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 TCAPO15273 167 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 MGAT3Q09327 533 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 RPS17P08708 135 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 PTGIRP43119 386 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 SULT1A2P50226 295 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 PCLAFQ15004 111 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 PLBD1Q6P4A8 553 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 OR1J2Q8NGS2 313 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 FAM163AQ96GL9 167 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 RGPD1P0DJD0 1748 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 LRRC30A6NM36 301 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 DPP4P27487 766 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 RPL11P62913 178 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 OR7D2Q96RA2 312 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 C1orf198Q9H425 327 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 HRASLS2Q9NWW9 162 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 HHLA2Q9UM44 414 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 A6NCN8 305 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 HIDE1A8MVS5 230 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 SIX3O95343 332 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 ORM1P02763 201 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 GABRR1P24046 479 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 FOXN2P32314 431 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 TCTE1Q5JU00 501 aa18.24■□□□□ 0.51
CACNA1A-257ENST00000638009 ABHD17BQ5VST6 288 aa18.23■□□□□ 0.51
CACNA1A-257ENST00000638009 BLOC1S3Q6QNY0 202 aa18.23■□□□□ 0.51
CACNA1A-257ENST00000638009 ZNF454Q8N9F8 522 aa18.23■□□□□ 0.51
CACNA1A-257ENST00000638009 DBF4BQ8NFT6 615 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms