RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 UGT2B17O75795 530 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 H6PDO95479 791 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 SOD3P08294 240 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 OR3A2P47893 321 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 CCR4P51679 360 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 RASGEF1BQ0VAM2 473 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 C3orf33Q6P1S2 294 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 SEZ6L2Q6UXD5 910 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 BHLHA15Q7RTS1 189 aaPredicted RBP16.37■□□□□ 0.21
CLN6-220ENST00000637450 NUDCD3Q8IVD9 361 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 ZNF619Q8N2I2 560 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 PIWIL2Q8TC59 973 aaKnown RBP16.37■□□□□ 0.21
CLN6-220ENST00000637450 ST8SIA1Q92185 356 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 ZNF75CPQ92670 426 aaPredicted RBP16.37■□□□□ 0.21
CLN6-220ENST00000637450 FBXW5Q969U6 566 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 TRIM44Q96DX7 344 aaPredicted RBP16.37■□□□□ 0.21
CLN6-220ENST00000637450 ZIM3Q96PE6 472 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 OR5B2Q96R09 309 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 POTEKPQ9BYX7 375 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 QRSL1Q9H0R6 528 aaKnown RBP16.37■□□□□ 0.21
CLN6-220ENST00000637450 MKLN1Q9UL63 735 aa16.37■□□□□ 0.21
CLN6-220ENST00000637450 FREM1Q5H8C1 2179 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 CENPVL1A0A0U1RR11 272 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 ZNF724A8MTY0 619 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 C9JVG2 144 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 INAFM1C9JVW0 142 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 SMAD9O15198 467 aaKnown RBP16.36■□□□□ 0.21
CLN6-220ENST00000637450 ITM2AO43736 263 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 SCN2BO60939 215 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 CYP7B1O75881 506 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 CSTAP01040 98 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 SESN3P58005 492 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 TNK1Q13470 666 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 ZNF672Q499Z4 452 aaPredicted RBP16.36■□□□□ 0.21
CLN6-220ENST00000637450 AP1ARQ63HQ0 302 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 HEPHL1Q6MZM0 1159 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 DNAJC14Q6Y2X3 702 aaPredicted RBP16.36■□□□□ 0.21
CLN6-220ENST00000637450 OLIG3Q7RTU3 272 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 ATG4DQ86TL0 474 aaPredicted RBP16.36■□□□□ 0.21
CLN6-220ENST00000637450 OR8J2Q8NGG1 315 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 MIPOL1Q8TD10 442 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 SMAP2Q8WU79 429 aaPredicted RBP16.36■□□□□ 0.21
CLN6-220ENST00000637450 NEUROG1Q92886 237 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 ZNF775Q96BV0 537 aaPredicted RBP16.36■□□□□ 0.21
CLN6-220ENST00000637450 SLC35G5Q96KT7 338 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 ZNF350Q9GZX5 532 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 AKTIPQ9H8T0 292 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 SERINC1Q9NRX5 453 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 PRSS50Q9UI38 385 aa16.36■□□□□ 0.21
CLN6-220ENST00000637450 RNF103-CHMP3A0A140T963 221 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 DPRXA6NFQ7 191 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 GUSBP08236 651 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 PGCP20142 388 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 EDNRAP25101 427 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 PPP2R2BQ00005 443 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 MAPK14Q16539 360 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 TMPPEQ6ZT21 453 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 EIF3MQ7L2H7 374 aaKnown RBP16.35■□□□□ 0.21
CLN6-220ENST00000637450 OR4A15Q8NGL6 344 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 AENQ8WTP8 325 aaKnown RBP16.35■□□□□ 0.21
CLN6-220ENST00000637450 TMEM234Q8WY98 164 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 TRMT61AQ96FX7 289 aaKnown RBP16.35■□□□□ 0.21
CLN6-220ENST00000637450 ZNF300Q96RE9 604 aaPredicted RBP16.35■□□□□ 0.21
CLN6-220ENST00000637450 TMEM109Q9BVC6 243 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 OR51I1Q9H343 314 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 ACER3Q9NUN7 267 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 EXD2Q9NVH0 621 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 PCDHGB4Q9UN71 923 aa16.35■□□□□ 0.21
CLN6-220ENST00000637450 PRSS51A0A1B0GVH4 220 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 KIAA1324LA8MWY0 1029 aaPredicted RBP16.34■□□□□ 0.21
CLN6-220ENST00000637450 LYZL6O75951 148 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 AGR2O95994 175 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 UBTFL6P0CB48 400 aaPredicted RBP16.34■□□□□ 0.21
CLN6-220ENST00000637450 PGM1P36871 562 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 DIO1P49895 249 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 CASP9P55211 416 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 PHC1P78364 1004 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 BSPH1Q075Z2 132 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 MERTKQ12866 999 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 PDCD2Q16342 344 aaPredicted RBP16.34■□□□□ 0.21
CLN6-220ENST00000637450 CLEC12BQ2HXU8 276 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 C16orf62Q7Z3J2 963 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 GALNT5Q7Z7M9 940 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 ZNF781Q8N8C0 355 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 XAGE5Q8WWM1 108 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 OIT3Q8WWZ8 545 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 PKNOX2Q96KN3 472 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 PPP1R36Q96LQ0 422 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 TRIM2Q9C040 744 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 SAP130Q9H0E3 1048 aa16.34■□□□□ 0.21
CLN6-220ENST00000637450 CADP27708 2225 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 SULT2B1O00204 365 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 KIAA0513O60268 411 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 SERPINE1P05121 402 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 OR12D1P0DN82 309 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 UQCRC2P22695 453 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 IDUAP35475 653 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 APOBEC1P41238 236 aaKnown RBP16.33■□□□□ 0.2
CLN6-220ENST00000637450 ABCE1P61221 599 aaKnown RBP16.33■□□□□ 0.2
CLN6-220ENST00000637450 CSNK2A1P68400 391 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms