RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 C3orf49Q96BT1 292 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 ARSGQ96EG1 525 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 MUS81Q96NY9 551 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 NODALQ96S42 347 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 SLC19A3Q9BZV2 496 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 ZNF696Q9H7X3 374 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 SDHAF3Q9NRP4 125 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 REV1Q9UBZ9 1251 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 ICAM5Q9UMF0 924 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 PCDHGB6Q9Y5F9 930 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 GMPPBQ9Y5P6 360 aa14.03□□□□□ -0.16
CLN6-219ENST00000637329 ASH1LQ9NR48 2969 aaKnown RBP14.03□□□□□ -0.16
CLN6-219ENST00000637329 IGLV3-32A0A0A0MS00 114 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 KLF4O43474 513 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 OIP5O43482 229 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 SCO2O43819 266 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 CDC40O60508 579 aaKnown RBP eCLIP14.02□□□□□ -0.17
CLN6-219ENST00000637329 LYNP07948 512 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 MSX1P28360 303 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 GGT2P36268 569 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 SOX3P41225 446 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 SLC1A3P43003 542 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 CCR4P51679 360 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 PRKCDQ05655 676 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 C17orf67Q0P5P2 114 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 ATP1A4Q13733 1029 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 DESI1Q6ICB0 168 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 CBLN3Q6UW01 205 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 LINC00114Q6XXX2 140 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 WDR88Q6ZMY6 472 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 RASSF6Q6ZTQ3 369 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 RPS19BP1Q86WX3 136 aaKnown RBP14.02□□□□□ -0.17
CLN6-219ENST00000637329 NRMQ8IXM6 262 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 CADM2Q8N3J6 435 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 CLDN22Q8N7P3 220 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 B4GALNT2Q8NHY0 566 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 ASB15Q8WXK1 588 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 NXPE2Q96DL1 559 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 YTHDF1Q9BYJ9 559 aaKnown RBP14.02□□□□□ -0.17
CLN6-219ENST00000637329 ING2Q9H160 280 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 CPNE5Q9HCH3 593 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 MED31Q9Y3C7 131 aa14.02□□□□□ -0.17
CLN6-219ENST00000637329 A0A087WUJ7 227 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 ANKUB1A6NFN9 424 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 ZAR1LA6NP61 321 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 CDK2AP1O14519 115 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 POU2F1P14859 743 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 CHMP24386 653 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 CRISP1P54107 249 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 GAS1P54826 345 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 MYBPC1Q00872 1141 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 TEKQ02763 1124 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 Q0VFX4 171 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 CAMK2BQ13554 666 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 RAPSNQ13702 412 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 KCTD21Q4G0X4 260 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 ATG4DQ86TL0 474 aaPredicted RBP14.01□□□□□ -0.17
CLN6-219ENST00000637329 MARCH9Q86YJ5 346 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 DEPDC4Q8N2C3 294 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 SLC43A2Q8N370 569 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 FBLIM1Q8WUP2 373 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 FER1L6-AS2Q96M78 137 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 TMEM43Q9BTV4 400 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 RTN4RQ9BZR6 473 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 METTL7AQ9H8H3 244 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 KLRF1Q9NZS2 232 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 WIF1Q9Y5W5 379 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 CHCHD2Q9Y6H1 151 aaPredicted RBP14.01□□□□□ -0.17
CLN6-219ENST00000637329 PCSK5Q92824 1860 aa14.01□□□□□ -0.17
CLN6-219ENST00000637329 CLIC3O95833 236 aa14□□□□□ -0.17
CLN6-219ENST00000637329 POLR2IP36954 125 aaKnown RBP14□□□□□ -0.17
CLN6-219ENST00000637329 HTR3AP46098 478 aa14□□□□□ -0.17
CLN6-219ENST00000637329 IDH2P48735 452 aaKnown RBP14□□□□□ -0.17
CLN6-219ENST00000637329 DLX5P56178 289 aa14□□□□□ -0.17
CLN6-219ENST00000637329 CDC42P60953 191 aa14□□□□□ -0.17
CLN6-219ENST00000637329 AIMP2Q13155 320 aaKnown RBP14□□□□□ -0.17
CLN6-219ENST00000637329 DCAF10Q5QP82 559 aa14□□□□□ -0.17
CLN6-219ENST00000637329 RPL13AP3Q6NVV1 102 aa14□□□□□ -0.17
CLN6-219ENST00000637329 SLC30A6Q6NXT4 461 aa14□□□□□ -0.17
CLN6-219ENST00000637329 TTC33Q6PID6 262 aaPredicted RBP14□□□□□ -0.17
CLN6-219ENST00000637329 C19orf48Q6RUI8 117 aa14□□□□□ -0.17
CLN6-219ENST00000637329 TMPRSS11FQ6ZWK6 438 aa14□□□□□ -0.17
CLN6-219ENST00000637329 CDK20Q8IZL9 346 aa14□□□□□ -0.17
CLN6-219ENST00000637329 AMER2Q8N7J2 671 aa14□□□□□ -0.17
CLN6-219ENST00000637329 OR10G3Q8NGC4 313 aa14□□□□□ -0.17
CLN6-219ENST00000637329 OR5M3Q8NGP4 307 aa14□□□□□ -0.17
CLN6-219ENST00000637329 ZNF563Q8TA94 476 aa14□□□□□ -0.17
CLN6-219ENST00000637329 PAQR8Q8TEZ7 354 aa14□□□□□ -0.17
CLN6-219ENST00000637329 ST8SIA1Q92185 356 aa14□□□□□ -0.17
CLN6-219ENST00000637329 SH3YL1Q96HL8 342 aaPredicted RBP14□□□□□ -0.17
CLN6-219ENST00000637329 FAM46AQ96IP4 442 aaKnown RBP14□□□□□ -0.17
CLN6-219ENST00000637329 FRMD6Q96NE9 622 aa14□□□□□ -0.17
CLN6-219ENST00000637329 PRRG3Q9BZD7 231 aa14□□□□□ -0.17
CLN6-219ENST00000637329 CDCP1Q9H5V8 836 aa14□□□□□ -0.17
CLN6-219ENST00000637329 SLC25A19Q9HC21 320 aa14□□□□□ -0.17
CLN6-219ENST00000637329 CNIH4Q9P003 139 aa14□□□□□ -0.17
CLN6-219ENST00000637329 IL17BQ9UHF5 180 aa14□□□□□ -0.17
CLN6-219ENST00000637329 TEKT2Q9UIF3 430 aa14□□□□□ -0.17
CLN6-219ENST00000637329 MYRFQ9Y2G1 1151 aa14□□□□□ -0.17
CLN6-219ENST00000637329 MRPS18BQ9Y676 258 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms