RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CGAP01215 116 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 C1QCP02747 245 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 RYKP34925 604 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 PGM1P36871 562 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 SESN3P58005 492 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 KCNJ10P78508 379 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 MERTKQ12866 999 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 GNA13Q14344 377 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 RNPS1Q15287 305 aaKnown RBP12.35□□□□□ -0.43
PNKP-228ENST00000637325 POU4F3Q15319 338 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 GUSBP1Q15486 140 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 SYPL1Q16563 259 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 SLC25A53Q5H9E4 307 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 COX20Q5RI15 118 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 TMEM201Q5SNT2 666 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 C6orf10Q5SRN2 563 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 LRRC74BQ6ZQY2 392 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 MSANTD1Q6ZTZ1 278 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 STK32CQ86UX6 486 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 ARFGAP2Q8N6H7 521 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 ANKFN1Q8N957 763 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 OR9I1Q8NGQ6 314 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 ZG16BQ96DA0 208 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 MED18Q9BUE0 208 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 KLHL4Q9C0H6 718 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 QRSL1Q9H0R6 528 aaKnown RBP12.35□□□□□ -0.43
PNKP-228ENST00000637325 VIPAS39Q9H9C1 493 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 TCF7L2Q9NQB0 619 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 PLSCR4Q9NRQ2 329 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 INTS9Q9NV88 658 aaKnown RBP12.35□□□□□ -0.43
PNKP-228ENST00000637325 ARID1AO14497 2285 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 A0A1W2PNR3 127 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 PRAMEF27A3QJZ7 478 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 NTN1O95631 604 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 IL7RP16871 459 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 DNASE1P24855 282 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 UGT2B10P36537 528 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 CRATP43155 626 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 PCYT1AP49585 367 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 PPP2R2AP63151 447 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 ZNF239Q16600 458 aaKnown RBP12.34□□□□□ -0.43
PNKP-228ENST00000637325 C3orf33Q6P1S2 294 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 PLEKHM3Q6ZWE6 761 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 FCRLAQ7L513 359 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 WDR60Q8WVS4 1066 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 VPS33AQ96AX1 596 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 ZNF524Q96C55 264 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 OR5B2Q96R09 309 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 SRXN1Q9BYN0 137 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 C12orf49Q9H741 205 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 MTHFD2LQ9H903 347 aaPredicted RBP12.34□□□□□ -0.43
PNKP-228ENST00000637325 ACER3Q9NUN7 267 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 KLHL28Q9NXS3 571 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 ZNF226Q9NYT6 803 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 P2RX2Q9UBL9 471 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 ST6GALNAC2Q9UJ37 374 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 TESMINQ9Y4I5 508 aa12.34□□□□□ -0.43
PNKP-228ENST00000637325 SPIN1Q9Y657 262 aaPredicted RBP12.34□□□□□ -0.43
PNKP-228ENST00000637325 TMEM247A6NEH6 219 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 ETV2O00321 342 aaPredicted RBP12.33□□□□□ -0.44
PNKP-228ENST00000637325 DNAJA2O60884 412 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 PRKD3O94806 890 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 DBIP07108 87 aaKnown RBP12.33□□□□□ -0.44
PNKP-228ENST00000637325 CHRM4P08173 479 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 ZCCHC18P0CG32 403 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 TFPIP10646 304 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 MAGEA8P43361 318 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 IDH3AP50213 366 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 ART1P52961 327 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 IST1P53990 364 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 AQP5P55064 265 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 RAC3P60763 192 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 DSTNP60981 165 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 AP1ARQ63HQ0 302 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 BEND4Q6ZU67 534 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 CMIPQ8IY22 773 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 PEX5LQ8IYB4 626 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 RNF128Q8TEB7 428 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 ABHD3Q8WU67 409 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 PMM1Q92871 262 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 NINJ1Q92982 152 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 ZC3HAV1LQ96H79 300 aaKnown RBP12.33□□□□□ -0.44
PNKP-228ENST00000637325 CCDC28BQ9BUN5 200 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 SLC38A1Q9H2H9 487 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 LIME1Q9H400 295 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 HEATR1Q9H583 2144 aaKnown RBP12.33□□□□□ -0.44
PNKP-228ENST00000637325 COQ10BQ9H8M1 238 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 TPT1P8Q9HAU6 139 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 CACYBPQ9HB71 228 aaKnown RBP12.33□□□□□ -0.44
PNKP-228ENST00000637325 EXOSC3Q9NQT5 275 aaKnown RBP12.33□□□□□ -0.44
PNKP-228ENST00000637325 SLC6A13Q9NSD5 602 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 CALML5Q9NZT1 146 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 PLEKHA6Q9Y2H5 1048 aa12.33□□□□□ -0.44
PNKP-228ENST00000637325 IGHV3-15A0A0B4J1V0 119 aa12.32□□□□□ -0.44
PNKP-228ENST00000637325 AGAP5A6NIR3 686 aa12.32□□□□□ -0.44
PNKP-228ENST00000637325 CLDN24A6NM45 220 aa12.32□□□□□ -0.44
PNKP-228ENST00000637325 BCAS1O75363 584 aaPredicted RBP12.32□□□□□ -0.44
PNKP-228ENST00000637325 HRGP04196 525 aa12.32□□□□□ -0.44
PNKP-228ENST00000637325 ETFAP13804 333 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms