RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 ALKBH2Q6NS38 261 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 WDR93Q6P2C0 686 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 NUDCD3Q8IVD9 361 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 NATD1Q8N6N6 113 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 ZNF527Q8NB42 609 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 OR8J2Q8NGG1 315 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 MIPOL1Q8TD10 442 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 AKAP1Q92667 903 aaKnown RBP eCLIP11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 MOAP1Q96BY2 351 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 LAT2Q9GZY6 243 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
SOX2-OT-241ENST00000626948 CR1P17927 2039 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 RNF103-CHMP3A0A140T963 221 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 DPRXA6NFQ7 191 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 OVOL3O00110 214 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 RAMP1O60894 148 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 PRKD3O94806 890 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 SERPINE1P05121 402 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 YES1P07947 543 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 THBS1P07996 1170 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 ALDOCP09972 364 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 OR12D1P0DN82 309 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 IL12AP29459 219 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 OR3A2P47893 321 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 RAC3P60763 192 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 ABCE1P61221 599 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 SELENBP1Q13228 472 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 CASP8Q14790 479 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 RNPS1Q15287 305 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 SMU1Q2TAY7 513 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 TMEM201Q5SNT2 666 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 SAXO2Q658L1 398 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 ADAM5Q6NVV9 412 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 EMBQ6PCB8 327 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 FRRS1Q6ZNA5 592 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 MREGQ8N565 214 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 DNAJA3Q96EY1 480 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 SAP130Q9H0E3 1048 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 GP6Q9HCN6 339 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 PNPOQ9NVS9 261 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 NOP53Q9NZM5 478 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 NPAP1Q9NZP6 1156 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 HAO1Q9UJM8 370 aa11.98□□□□□ -0.49
SOX2-OT-241ENST00000626948 KIAA1324LA8MWY0 1029 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 KIAA0513O60268 411 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 CYTIPO60759 359 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 NDUFS7O75251 213 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 KRT16P08779 473 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 UBTFL6P0CB48 400 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 BGNP21810 368 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 CCR4P51679 360 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 FOXG1P55316 489 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 CBFBQ13951 182 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 MAPK11Q15759 364 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 PGGHGQ32M88 737 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 SPANXN4Q5MJ08 99 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 GTF2IRD2BQ6EKJ0 949 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 TNFAIP8L2Q6P589 184 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 GTF2IRD2Q86UP8 949 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 STK32CQ86UX6 486 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 TMCO5AQ8N6Q1 288 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 TOR1AIP2Q8NFQ8 470 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 KBTBD8Q8NFY9 601 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 OR4A15Q8NGL6 344 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 PIWIL2Q8TC59 973 aaKnown RBP11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 TRIM44Q96DX7 344 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 ARL5BQ96KC2 179 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 SLC35G5Q96KT7 338 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 OR5B2Q96R09 309 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 PRPF18Q99633 342 aaKnown RBP11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 CCDC106Q9BWC9 280 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 ADAM21Q9UKJ8 722 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 LAMP3Q9UQV4 416 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 RAP2CQ9Y3L5 183 aa11.97□□□□□ -0.49
SOX2-OT-241ENST00000626948 ZNF716A6NP11 495 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 INAFM1C9JVW0 142 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 H3BNH8 94 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 STX11O75558 287 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 CYP7B1O75881 506 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 LYZL6O75951 148 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 CPSF4O95639 269 aaKnown RBP11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 CSTAP01040 98 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 CD8AP01732 235 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 PABPC4LP0CB38 370 aaKnown RBP11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 DDX5P17844 614 aaKnown RBP11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 COX5AP20674 150 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 IGHV1-2P23083 117 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 CDKN2CP42773 168 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 DIO1P49895 249 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 BSPH1Q075Z2 132 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 RASGEF1BQ0VAM2 473 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 ITGADQ13349 1161 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 TNK1Q13470 666 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 KRT71Q3SY84 523 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 ABLIM2Q6H8Q1 611 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 C3orf33Q6P1S2 294 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 TMPPEQ6ZT21 453 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 Q6ZT83 130 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 HOMEZQ8IX15 550 aa11.96□□□□□ -0.49
SOX2-OT-241ENST00000626948 SLC43A2Q8N370 569 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms