RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 TRPV5Q9NQA5 729 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 DNAJB12Q9NXW2 375 aaKnown RBP11.04□□□□□ -0.64
TP53-227ENST00000622645 TMEM5Q9Y2B1 443 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 A8MV72 311 aaPredicted RBP11.04□□□□□ -0.64
TP53-227ENST00000622645 PRKNO60260 465 aaPredicted RBP11.04□□□□□ -0.64
TP53-227ENST00000622645 CTBP2P56545 445 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 PPP3R1P63098 170 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 ASAH1Q13510 395 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 ZNF267Q14586 743 aaPredicted RBP11.04□□□□□ -0.64
TP53-227ENST00000622645 ZNHIT3Q15649 155 aaPredicted RBP11.04□□□□□ -0.64
TP53-227ENST00000622645 NDUFAF6Q330K2 333 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 FAM27D1Q5T7N8 215 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 METTL27Q8N6F8 245 aaPredicted RBP11.04□□□□□ -0.64
TP53-227ENST00000622645 RCBTB1Q8NDN9 531 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 OR6F1Q8NGZ6 308 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 HOXB13Q92826 284 aaPredicted RBP11.04□□□□□ -0.64
TP53-227ENST00000622645 SLC22A4Q9H015 551 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 PPP1R3EQ9H7J1 279 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 ITGB1BP2Q9UKP3 347 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 POLHQ9Y253 713 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 SLC35A3Q9Y2D2 325 aa11.04□□□□□ -0.64
TP53-227ENST00000622645 CCDC182A6NF36 153 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 SLC22A31A6NKX4 558 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 RIIAD1A6NNX1 92 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 FOXS1O43638 330 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 HCN1O60741 890 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 E2F1Q01094 437 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 CRYZQ08257 329 aaKnown RBP11.03□□□□□ -0.64
TP53-227ENST00000622645 FHL1Q13642 323 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 GALEQ14376 348 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 RPL13AP3Q6NVV1 102 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 ZNF544Q6NX49 715 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 ARL9Q6T311 187 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 RPTNQ6XPR3 784 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 DEFB119Q8N690 84 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 OR5W2Q8NH69 310 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 VSTM2LQ96N03 204 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 MAP3K3Q99759 626 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 LMF2Q9BU23 707 aaKnown RBP11.03□□□□□ -0.64
TP53-227ENST00000622645 LRRC61Q9BV99 259 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 TTTY10Q9BZA0 68 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 POLE3Q9NRF9 147 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 C14orf105Q9NVL8 296 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 GRIP1Q9Y3R0 1128 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 MEIOCA2RUB1 952 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 LRRN3E7EW58 273 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 SBK2P0C263 348 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 CHRNB1P11230 501 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 EVX1P49640 407 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 PGDP52209 483 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 OR12D2P58182 307 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 IL18Q14116 193 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 NPSR1Q6W5P4 371 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 RTL4Q6ZR62 310 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 Q8N402 240 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 CAPSLQ8WWF8 208 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 PMM1Q92871 262 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 ZNF426Q9BUY5 554 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 LRRN3Q9H3W5 708 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 ADGRL4Q9HBW9 690 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 NEK6Q9HC98 313 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 MCCC2Q9HCC0 563 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 B3GAT2Q9NPZ5 323 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 TRIM36Q9NQ86 728 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 FBXL21Q9UKT6 434 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 ZMIZ1Q9ULJ6 1067 aa11.03□□□□□ -0.64
TP53-227ENST00000622645 J3QLW9 94 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 SEC14L5O43304 696 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 RGS9O75916 674 aaPredicted RBP11.02□□□□□ -0.64
TP53-227ENST00000622645 SLC2A2P11168 524 aaPredicted RBP11.02□□□□□ -0.64
TP53-227ENST00000622645 ZNF19P17023 458 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 MAOAP21397 527 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 SHC1P29353 583 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 KIR2DL3P43628 341 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 CCR5P51681 352 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 HCCSP53701 268 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 SLC3A1Q07837 685 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 PRTGQ2VWP7 1150 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 KIRREL2Q6UWL6 708 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 PARGQ86W56 976 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 LRRC17Q8N6Y2 441 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 C17orf47Q8NEP4 570 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 OR51L1Q8NGJ5 315 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 OR4C3Q8NH37 302 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 KLHDC7BQ96G42 594 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 C4orf36Q96KX1 117 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 SOSTQ9BQB4 213 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 LRIT1Q9P2V4 623 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 CLDN16Q9Y5I7 305 aa11.02□□□□□ -0.64
TP53-227ENST00000622645 MAGEB4O15481 346 aaPredicted RBP11.02□□□□□ -0.65
TP53-227ENST00000622645 KRT8P05787 483 aa11.02□□□□□ -0.65
TP53-227ENST00000622645 GAAP10253 952 aa11.02□□□□□ -0.65
TP53-227ENST00000622645 PEPDP12955 493 aa11.02□□□□□ -0.65
TP53-227ENST00000622645 RNH1P13489 461 aaKnown RBP11.02□□□□□ -0.65
TP53-227ENST00000622645 ZNF3P17036 446 aa11.02□□□□□ -0.65
TP53-227ENST00000622645 SLC2A5P22732 501 aa11.02□□□□□ -0.65
TP53-227ENST00000622645 ACVR1BP36896 505 aa11.02□□□□□ -0.65
TP53-227ENST00000622645 PPM1FP49593 454 aaPredicted RBP11.02□□□□□ -0.65
TP53-227ENST00000622645 IFITM2Q01629 132 aa11.02□□□□□ -0.65
TP53-227ENST00000622645 BDH1Q02338 343 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms