RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 PTGDSP41222 190 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 SLC1A3P43003 542 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 IDH2P48735 452 aaKnown RBP12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 UGT2B15P54855 530 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 SLC22A10Q63ZE4 541 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 B3GNTL1Q67FW5 361 aaPredicted RBP12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 LINC00114Q6XXX2 140 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 ZNF563Q8TA94 476 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 TMEM255BQ8WV15 326 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 TMEM239Q8WW34 195 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 SH3YL1Q96HL8 342 aaPredicted RBP12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 FRMD6Q96NE9 622 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 FAM118AQ9NWS6 357 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 STMN3Q9NZ72 180 aa12.98□□□□□ -0.33
CLTCL1-212ENST00000622493 A0A087WUJ7 227 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 HTR3EA5X5Y0 456 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 ZNF891A8MT65 544 aaPredicted RBP12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 SLC16A6O15403 523 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 MITFO75030 526 aaPredicted RBP12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 CYB561P49447 251 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 IL1RL1Q01638 556 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 NPRL3Q12980 569 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 KCNAB2Q13303 367 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 COL28A1Q2UY09 1125 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 ZIK1Q3SY52 487 aaPredicted RBP12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 ABHD17BQ5VST6 288 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 RTL4Q6ZR62 310 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 ZER1Q7Z7L7 766 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 GALNT5Q7Z7M9 940 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 MARVELD2Q8N4S9 558 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 PIGXQ8TBF5 258 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 CYGBQ8WWM9 190 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 C3orf49Q96BT1 292 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 MBOAT4Q96T53 435 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 GABARAPL3Q9BY60 117 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 ANGPTL4Q9BY76 406 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 GRIP2Q9C0E4 1043 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 GALNT9Q9HCQ5 603 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 PPP4R1LQ9P1A2 415 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 MED31Q9Y3C7 131 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 MSRB2Q9Y3D2 182 aa12.97□□□□□ -0.33
CLTCL1-212ENST00000622493 LOC100130705A0A1B0GUX0 176 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 SMIM31A0A1B0GVY4 71 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 ANKUB1A6NFN9 424 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 NKX2-8O15522 239 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 CDC40O60508 579 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 NUDT14O95848 222 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 POU2F1P14859 743 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 OMPP47874 163 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 HLCSP50747 726 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 ESRRGP62508 458 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 WDR88Q6ZMY6 472 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 NRMQ8IXM6 262 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 CDK20Q8IZL9 346 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 CYP4Z2PQ8N1L4 340 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 GALNT16Q8N428 558 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 ZNF248Q8NDW4 579 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 GNPDA2Q8TDQ7 276 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 GPR119Q8TDV5 335 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 KCNE4Q8WWG9 221 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 TMEM234Q8WY98 164 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 GTPBP3Q969Y2 492 aaKnown RBP12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 NTNG2Q96CW9 530 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 DPH1Q9BZG8 443 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 SLC19A3Q9BZV2 496 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 UCK2Q9BZX2 261 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 ADAM19Q9H013 955 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 PCDHGB6Q9Y5F9 930 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 DOCK10Q96BY6 2186 aa12.96□□□□□ -0.33
CLTCL1-212ENST00000622493 SNX4O95219 450 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 IGF2P01344 180 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 OSMP13725 252 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 CASRP41180 1078 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 PRKCDQ05655 676 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 TSPAN31Q12999 210 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 LSAMPQ13449 338 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 IL18R1Q13478 541 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 KEAP1Q14145 624 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 BICRALQ6AI39 1079 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 TTC33Q6PID6 262 aaPredicted RBP12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 KLHL17Q6TDP4 642 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 USP51Q70EK9 711 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 PRICKLE2Q7Z3G6 844 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 ATG4DQ86TL0 474 aaPredicted RBP12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 CHERPQ8IWX8 916 aaKnown RBP12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 BEST3Q8N1M1 668 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 ST8SIA1Q92185 356 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 RIBC2Q9H4K1 309 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 TAS2R10Q9NYW0 307 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 POLHQ9Y253 713 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 TMEM5Q9Y2B1 443 aa12.96□□□□□ -0.34
CLTCL1-212ENST00000622493 ARGFXA6NJG6 315 aa12.95□□□□□ -0.34
CLTCL1-212ENST00000622493 ELOA3DA6NLF2 546 aaPredicted RBP12.95□□□□□ -0.34
CLTCL1-212ENST00000622493 GP1BBP13224 206 aa12.95□□□□□ -0.34
CLTCL1-212ENST00000622493 MYF6P23409 242 aa12.95□□□□□ -0.34
CLTCL1-212ENST00000622493 FPR3P25089 353 aa12.95□□□□□ -0.34
CLTCL1-212ENST00000622493 MST1P26927 711 aa12.95□□□□□ -0.34
CLTCL1-212ENST00000622493 HTR3AP46098 478 aa12.95□□□□□ -0.34
CLTCL1-212ENST00000622493 GSSP48637 474 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms