RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 BDH1Q02338 343 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 ZNF791Q3KP31 576 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 ARMC6Q6NXE6 501 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 ZNF322Q6U7Q0 402 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 VWA5B2Q8N398 1253 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 SPRYD4Q8WW59 207 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 RSC1A1Q92681 617 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 SNX18Q96RF0 628 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 ATF6BQ99941 703 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 PPP1R3EQ9H7J1 279 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 SYNDIG1Q9H7V2 258 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 CACYBPQ9HB71 228 aaKnown RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 C19orf53Q9UNZ5 99 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 SLC22A7Q9Y694 548 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 SHISA3A0PJX4 238 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 TRAPPC13A5PLN9 417 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 OR5K3A6NET4 321 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 HMX3A6NHT5 357 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 SOCS6O14544 535 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 PLA2G10O15496 165 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 HCN1O60741 890 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 CTSVO60911 334 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 PROS1P07225 676 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 PNLIPP16233 465 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 POLR2CP19387 275 aaPredicted RBP16.12■□□□□ 0.17
FAM3A-222ENST00000621967 CAPZBP47756 277 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 OR1D5P58170 312 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 FXYD6P3P58550 94 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 SIM1P81133 766 aaPredicted RBP16.12■□□□□ 0.17
FAM3A-222ENST00000621967 RIN1Q13671 783 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.12■□□□□ 0.17
FAM3A-222ENST00000621967 PYDC2Q56P42 97 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 CXXC5Q7LFL8 322 aaKnown RBP16.12■□□□□ 0.17
FAM3A-222ENST00000621967 RANBP3LQ86VV4 465 aaPredicted RBP16.12■□□□□ 0.17
FAM3A-222ENST00000621967 MARCH9Q86YJ5 346 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 CPOQ8IVL8 374 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 GID4Q8IVV7 300 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 GALNT12Q8IXK2 581 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 ZNF619Q8N2I2 560 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 SIRT6Q8N6T7 355 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 ZCCHC10Q8TBK6 192 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 IFI44Q8TCB0 444 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 CAPSLQ8WWF8 208 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 DEPDC7Q96QD5 511 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 SECISBP2Q96T21 854 aaKnown RBP16.12■□□□□ 0.17
FAM3A-222ENST00000621967 TP63Q9H3D4 680 aaPredicted RBP16.12■□□□□ 0.17
FAM3A-222ENST00000621967 FN3KQ9H479 309 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 TNFRSF10DQ9UBN6 386 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 PILRAQ9UKJ1 303 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 SATB2Q9UPW6 733 aa16.12■□□□□ 0.17
FAM3A-222ENST00000621967 ZNF292O60281 2723 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 B4DXG7 233 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 DUX1O43812 170 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 B3GALT2O43825 422 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 LYPD3O95274 346 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 CELP19835 753 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 CFL1P23528 166 aaKnown RBP16.11■□□□□ 0.17
FAM3A-222ENST00000621967 HTR2AP28223 471 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 GPLD1P80108 840 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 AMZ1Q400G9 498 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 DEFB134Q4QY38 66 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 ZNF362Q5T0B9 420 aaPredicted RBP16.11■□□□□ 0.17
FAM3A-222ENST00000621967 FCRL6Q6DN72 434 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 OR4N5Q8IXE1 308 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 RNF113BQ8IZP6 322 aaKnown RBP16.11■□□□□ 0.17
FAM3A-222ENST00000621967 ATP6V1C2Q8NEY4 427 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 CCDC3Q9BQI4 270 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 TMED9Q9BVK6 235 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 MMP28Q9H239 520 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 OR52D1Q9H346 318 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 IL20RAQ9UHF4 553 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 COL5A1P20908 1838 aaPredicted RBP16.11■□□□□ 0.17
FAM3A-222ENST00000621967 LINC00854A0A1B0GVQ3 168 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 CCDC182A6NF36 153 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 URADA6NGE7 173 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 UNC119BA6NIH7 251 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 C2orf74A8MZ97 194 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 BHLHE40O14503 412 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 GFRA3O60609 400 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 DNAJB6O75190 326 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 DBIP07108 87 aaKnown RBP16.11■□□□□ 0.17
FAM3A-222ENST00000621967 TLX1P31314 330 aaPredicted RBP16.11■□□□□ 0.17
FAM3A-222ENST00000621967 RCVRNP35243 200 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 MAPK14Q16539 360 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 NDUFA5Q16718 116 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 TRMT12Q53H54 448 aaKnown RBP16.11■□□□□ 0.17
FAM3A-222ENST00000621967 NIPAL3Q6P499 406 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 CNIH2Q6PI25 160 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 WDR88Q6ZMY6 472 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 TMEM91Q6ZNR0 172 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 NEIL3Q8TAT5 605 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 HDHD5Q9BXW7 423 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 LYRM4Q9HD34 91 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 H2AFY2Q9P0M6 372 aaPredicted RBP16.11■□□□□ 0.17
FAM3A-222ENST00000621967 COMMD3Q9UBI1 195 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 ENTPD2Q9Y5L3 495 aa16.11■□□□□ 0.17
FAM3A-222ENST00000621967 FAM186AA6NE01 2351 aa16.1■□□□□ 0.17
FAM3A-222ENST00000621967 A0A087WV62 115 aa16.1■□□□□ 0.17
FAM3A-222ENST00000621967 IGHV1OR21-1A0A087WYE8 117 aa16.1■□□□□ 0.17
FAM3A-222ENST00000621967 IDH3BO43837 385 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms