RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 FASLGP48023 281 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 RGS6P49758 472 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ACTA2P62736 377 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ACTG2P63267 376 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 NKX3-2P78367 333 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 PRKCDQ05655 676 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 TP53I3Q53FA7 332 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 COX20Q5RI15 118 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 PRAMEF17Q5VTA0 474 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 GUSBP11Q6P575 273 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 TMEM151AQ8N4L1 468 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ZADH2Q8N4Q0 377 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 C12orf43Q96C57 262 aaKnown RBP8.6□□□□□ -1.03
GGA3-223ENST00000621870 HAVCR1Q96D42 359 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 MUCL1Q96DR8 90 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ALG14Q96F25 216 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 MRGPRX3Q96LB0 322 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 TEX37Q96LM6 180 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 KLHL15Q96M94 604 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ZNF583Q96ND8 569 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 NECAB3Q96P71 396 aaPredicted RBP8.6□□□□□ -1.03
GGA3-223ENST00000621870 CPPED1Q9BRF8 314 aaPredicted RBP8.6□□□□□ -1.03
GGA3-223ENST00000621870 MENTQ9BUN1 341 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 SAP130Q9H0E3 1048 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 PARPBPQ9NWS1 579 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ABCG2Q9UNQ0 655 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 TEX13CA0A0J9YWL9 993 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 KLK10O43240 276 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 SYT7O43581 403 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 BMP2P12643 396 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 APLNRP35414 380 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 FRKP42685 505 aaPredicted RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 HTR3AP46098 478 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 ZNF829Q3KNS6 432 aaPredicted RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 MFSD12Q6NUT3 480 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 AAED1Q7RTV5 226 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 ZFP90Q8TF47 636 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 HPS1Q92902 700 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 SPTSSAQ969W0 71 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 FUZQ9BT04 418 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 FN3KQ9H479 309 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 SMURF1Q9HCE7 757 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 FSCN3Q9NQT6 498 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 NUFIP1Q9UHK0 495 aaKnown RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 SLC17A4Q9Y2C5 497 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 IGHV1OR15-9A0A0B4J2B8 117 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 TRBV5-4A0A0C4DH59 114 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 DCDC2BA2VCK2 349 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 TMEM221A6NGB7 291 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 A6NIZ1 184 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 CENPBD1B2RD01 187 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 M0R296 226 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 ARHGAP33O14559 1287 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 CSO75390 466 aaKnown RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 NSA2O95478 260 aaKnown RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 LCKP06239 509 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 NME1P15531 152 aaKnown RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 GRK5P34947 590 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 RAP1BP61224 184 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 RAP1AP62834 184 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 CCL7P80098 99 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 C11orf91Q3C1V1 193 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 CMPK2Q5EBM0 449 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 FAM71E1Q6IPT2 247 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 TMEM71Q6P5X7 295 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 OR13C3Q8NGS6 347 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 OR13C2Q8NGS9 318 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 ARSGQ96EG1 525 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 ZNF845Q96IR2 970 aaPredicted RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 CCDC74BQ96LY2 380 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 KATNB1Q9BVA0 655 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 ATG5Q9H1Y0 275 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 VSX1Q9NZR4 365 aaPredicted RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 EMC3Q9P0I2 261 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 A0A0X1KG70 313 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 PLSCR5A0PG75 271 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 MTRF1O75570 445 aaKnown RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 ERCC1P07992 297 aaPredicted RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 GIPRP48546 466 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 B4GALNT1Q00973 533 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 SIGLEC14Q08ET2 396 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 CAMK2DQ13557 499 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 EIF2B1Q14232 305 aaKnown RBP8.59□□□□□ -1.03
GGA3-223ENST00000621870 RAB39AQ14964 217 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 TNFAIP8L3Q5GJ75 292 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 BCL2L15Q5TBC7 163 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 CYHR1Q6ZMK1 362 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 MARCH3Q86UD3 253 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 NLRP8Q86W28 1048 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 KDM8Q8N371 416 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 MS4A15Q8N5U1 240 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 CADM4Q8NFZ8 388 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 CASTOR1Q8WTX7 329 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 MZB1Q8WU39 189 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 CALHM2Q9HA72 323 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 ENAMQ9NRM1 1142 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 EXTL2Q9UBQ6 330 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 KLHL21Q9UJP4 597 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 NPFFR2Q9Y5X5 522 aa8.59□□□□□ -1.03
GGA3-223ENST00000621870 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms