RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ZNF550Q7Z398 422 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 MAML2Q8IZL2 1156 aaPredicted RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 CARFQ8N187 725 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 GHDCQ8N2G8 530 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 TMEM105Q8N8V8 129 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 OR2T33Q8NG76 320 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 OR4Q3Q8NH05 313 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 STT3BQ8TCJ2 826 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 TRUB1Q8WWH5 349 aaKnown RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 ITPKCQ96DU7 683 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 TMEM80Q96HE8 168 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 ZNF582Q96NG8 517 aaPredicted RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 PRSS27Q9BQR3 290 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 MESP1Q9BRJ9 268 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 CHCHD6Q9BRQ6 235 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 OR52D1Q9H346 318 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 SRPK3Q9UPE1 567 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 PCDHGB1Q9Y5G3 927 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 EFCAB9A8MZ26 197 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 GDF9O60383 454 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 MSL3P1P0C860 447 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 GADD45AP24522 165 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 SLC9A3P48764 834 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 PSMD4P55036 377 aaKnown RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 RPS3AP61247 264 aaKnown RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 IFITM2Q01629 132 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 PLCXD2Q0VAA5 305 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 TBCEQ15813 527 aaPredicted RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 ZNF829Q3KNS6 432 aaPredicted RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 EXOSC6Q5RKV6 272 aaKnown RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 PAQR6Q6TCH4 344 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 KIRREL2Q6UWL6 708 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 B3GLCTQ6Y288 498 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 ZNF620Q6ZNG0 422 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 SLCO6A1Q86UG4 719 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 ANKRD13BQ86YJ7 626 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 ZNF527Q8NB42 609 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 SLC38A9Q8NBW4 561 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 ZNF563Q8TA94 476 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 NAT6Q93015 286 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 RNFT2Q96EX2 444 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 SLC46A1Q96NT5 459 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 POLDIP3Q9BY77 421 aaKnown RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 TRIM2Q9C040 744 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 MKKSQ9NPJ1 570 aaPredicted RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 FKBP14Q9NWM8 211 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 SIDT1Q9NXL6 827 aaKnown RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 CDH10Q9Y6N8 788 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 H3BMH7 237 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 MTRF1O75570 445 aaKnown RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 SOX30O94993 753 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 UTS2O95399 124 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 CER1O95813 267 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 ADRA2AP08913 450 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 MYL12AP19105 171 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 DRD5P21918 477 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 HOXA6P31267 233 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 CSTF2P33240 577 aaKnown RBP eCLIP9.14□□□□□ -0.95
VTA1-205ENST00000620996 EFNA3P52797 238 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 CDH11P55287 796 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 CDK5Q00535 292 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 RHAGQ02094 409 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 PLAURQ03405 335 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 PGGHGQ32M88 737 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 PXDC1Q5TGL8 231 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 CD300LDQ6UXZ3 194 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 TMEM163Q8TC26 289 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 METTL21AQ8WXB1 218 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 ZHX1-C8orf76Q96EF9 292 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 LCORQ96JN0 433 aaPredicted RBP9.14□□□□□ -0.95
VTA1-205ENST00000620996 DEPDC7Q96QD5 511 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 MED20Q9H944 212 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 CFL2Q9Y281 166 aa9.14□□□□□ -0.95
VTA1-205ENST00000620996 LY6G6EA0A0G2JKS1 128 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 SNTNA6NMZ2 147 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 EFCAB7A8K855 629 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 LRRN3E7EW58 273 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 M0R296 226 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 SCO2O43819 266 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 MRPS14O60783 128 aaKnown RBP9.13□□□□□ -0.95
VTA1-205ENST00000620996 SOX3P41225 446 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 FGFBP1Q14512 234 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 GXYLT1Q4G148 440 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 NKAIN1Q4KMZ8 207 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 FAM69BQ5VUD6 431 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 C16orf47Q6ZP98 133 aaPredicted RBP9.13□□□□□ -0.95
VTA1-205ENST00000620996 OAFQ86UD1 273 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 IGFN1Q86VF2 1251 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 BBS1Q8NFJ9 593 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 FKBP10Q96AY3 582 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 YIPF6Q96EC8 236 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 HS6ST2Q96MM7 605 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 DOK1Q99704 481 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 ZBTB20Q9HC78 741 aaPredicted RBP9.13□□□□□ -0.95
VTA1-205ENST00000620996 OCIAD1Q9NX40 245 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 CNOT2Q9NZN8 540 aaKnown RBP9.13□□□□□ -0.95
VTA1-205ENST00000620996 ADAMTS9Q9P2N4 1935 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 MRTO4Q9UKD2 239 aaKnown RBP9.13□□□□□ -0.95
VTA1-205ENST00000620996 U3KQA8 63 aa9.13□□□□□ -0.95
VTA1-205ENST00000620996 NADKO95544 446 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms