RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 RPS18P62269 152 aaKnown RBP14.47□□□□□ -0.09
CPSF1-213ENST00000620219 MBOAT2Q6ZWT7 520 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 PRSS48Q7RTY5 328 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 OR4C15Q8NGM1 316 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF226Q9NYT6 803 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 SSR3Q9UNL2 185 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 PPIEQ9UNP9 301 aaKnown RBP14.47□□□□□ -0.09
CPSF1-213ENST00000620219 PRKYO43930 277 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 HK1P19367 917 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 MTNR1AP48039 350 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 GP2P55259 537 aaKnown RBP14.47□□□□□ -0.09
CPSF1-213ENST00000620219 CTXN1P60606 82 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF791Q3KP31 576 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-213ENST00000620219 XAF1Q6GPH4 301 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 RHBDD2Q6NTF9 364 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 NUP54Q7Z3B4 507 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 DNAJA4Q8WW22 397 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-213ENST00000620219 GATAD2BQ8WXI9 593 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF578Q96N58 590 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-213ENST00000620219 PLA2G12AQ9BZM1 189 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 AKIRIN1Q9H9L7 192 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-213ENST00000620219 MED11Q9P086 117 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 GRHPRQ9UBQ7 328 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 NPFFR2Q9Y5X5 522 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 J3QLW9 94 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 TP53I11O14683 189 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 FLRT2O43155 660 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 SEMG1P04279 462 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 THBS1P07996 1170 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 IMPDH2P12268 514 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF19P17023 458 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 GADD45AP24522 165 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 SOX3P41225 446 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 ILKQ13418 452 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 CRTC2Q53ET0 693 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-213ENST00000620219 TMPRSS9Q7Z410 1059 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 FOXN4Q96NZ1 517 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 OR5M11Q96RB7 305 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 MGLLQ99685 303 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 RHBDL2Q9NX52 303 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 ALKBH4Q9NXW9 302 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 ARHGEF9O43307 516 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 SLC2A10O95528 541 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 CBLN3Q6UW01 205 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF574Q6ZN55 896 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-213ENST00000620219 SIRT6Q8N6T7 355 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 POMGNT2Q8NAT1 580 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 MCFD2Q8NI22 146 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 B3GALT1Q9Y5Z6 326 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 CDH10Q9Y6N8 788 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 KIAA1549LQ6ZVL6 1849 aa14.47□□□□□ -0.09
CPSF1-213ENST00000620219 TGFBR3LH3BV60 316 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 OCM2P0CE71 109 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 OCMP0CE72 109 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-213ENST00000620219 PTPMT1Q8WUK0 201 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-213ENST00000620219 DCSTAMPQ9H295 470 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 PTGES2Q9H7Z7 377 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 HPF1Q9NWY4 346 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 TAS2R10Q9NYW0 307 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 FBXO4Q9UKT5 387 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 SATB2Q9UPW6 733 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 KIAA0513O60268 411 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 RPP14O95059 124 aaKnown RBP14.46□□□□□ -0.09
CPSF1-213ENST00000620219 PON3Q15166 354 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 LAIR2Q6ISS4 152 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 KIRREL2Q6UWL6 708 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 TMPRSS11AQ6ZMR5 421 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 CPEB2Q7Z5Q1 589 aaKnown RBP14.46□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF440Q8IYI8 595 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 OR4F15Q8NGB8 312 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 TMEM234Q8WY98 164 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 VSTM2LQ96N03 204 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 OR51E2Q9H255 320 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF160Q9HCG1 818 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 SDHAF3Q9NRP4 125 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 CLEC2DQ9UHP7 191 aa14.46□□□□□ -0.09
CPSF1-213ENST00000620219 DCAF7P61962 342 aa14.46□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF91Q05481 1191 aa14.46□□□□□ -0.1
CPSF1-213ENST00000620219 INAQ16352 499 aa14.46□□□□□ -0.1
CPSF1-213ENST00000620219 ODF4Q2M2E3 257 aa14.46□□□□□ -0.1
CPSF1-213ENST00000620219 ARL9Q6T311 187 aa14.46□□□□□ -0.1
CPSF1-213ENST00000620219 PAQR6Q6TCH4 344 aa14.46□□□□□ -0.1
CPSF1-213ENST00000620219 ZMYND19Q96E35 227 aaPredicted RBP14.46□□□□□ -0.1
CPSF1-213ENST00000620219 TMED9Q9BVK6 235 aa14.46□□□□□ -0.1
CPSF1-213ENST00000620219 PSMD9O00233 223 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 OR2J2O76002 312 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 CELP19835 753 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 RNF4P78317 190 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 RAET1LQ5VY80 246 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 NPSR1Q6W5P4 371 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF687Q8N1G0 1237 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 KDM8Q8N371 416 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 SLC38A9Q8NBW4 561 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 OR5M1Q8NGP8 315 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 LGALS12Q96DT0 336 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 MESP1Q9BRJ9 268 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 WWTR1Q9GZV5 400 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 RNF167Q9H6Y7 350 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 SERINC1Q9NRX5 453 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 LNP1A1A4G5 178 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms