RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 TMEM127O75204 238 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 INPP1P49441 399 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 RAB8AP61006 207 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 FGL2Q14314 439 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 EIPR1Q53HC9 387 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 FAM199XQ6PEV8 388 aaPredicted RBP12.09□□□□□ -0.47
SKP2-209ENST00000620197 C16orf62Q7Z3J2 963 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 MS4A15Q8N5U1 240 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 OR56B4Q8NH76 319 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 TMEM239Q8WW34 195 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 KAT2AQ92830 837 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 FAM131CQ96AQ9 280 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 SMIM19Q96E16 107 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 LRFN5Q96NI6 719 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 ACTR6Q9GZN1 396 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 XKR8Q9H6D3 395 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 TMEM5Q9Y2B1 443 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 SLC35A3Q9Y2D2 325 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 A0A1B0GVC2 190 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 A6NIN4 97 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 KHNYNO15037 678 aaKnown RBP12.09□□□□□ -0.47
SKP2-209ENST00000620197 BET1O15155 118 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 GUSBP08236 651 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 SYPP08247 313 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 NID1P14543 1247 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 RAB3BP20337 219 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 OR12D2P58182 307 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 PITPNAQ00169 270 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 TAGLNQ01995 201 aaKnown RBP12.09□□□□□ -0.47
SKP2-209ENST00000620197 TNFRSF17Q02223 184 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 GRK1Q15835 563 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 ACSM3Q53FZ2 586 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 SLC22A10Q63ZE4 541 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 RPTNQ6XPR3 784 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 SYS1Q8N2H4 156 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 FAM71CQ8NEG0 241 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 OR52E1Q8NGJ3 308 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 ZNF707Q96C28 371 aaPredicted RBP12.09□□□□□ -0.47
SKP2-209ENST00000620197 B3GNT4Q9C0J1 378 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 IL21RQ9HBE5 538 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 SPHK1Q9NYA1 384 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 SLC17A4Q9Y2C5 497 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 FKBP7Q9Y680 259 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 C5orf42Q9H799 3197 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 ADH1CP00326 375 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 HPXP02790 462 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 STATHP02808 62 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 PCCBP05166 539 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 MNDAP41218 407 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 CCR6P51684 374 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 CLDN2P57739 230 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 DBPQ10586 325 aaPredicted RBP12.08□□□□□ -0.47
SKP2-209ENST00000620197 BAMBIQ13145 260 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 NOGQ13253 232 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 OR1Q1Q15612 314 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 RPE65Q16518 533 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 AANATQ16613 207 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 C2orf27AQ580R0 203 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 TMEM255AQ5JRV8 349 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 RRM2BQ7LG56 351 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 ADGRG3Q86Y34 549 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 OR8H3Q8N146 312 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 TOMM5Q8N4H5 51 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 ZNF527Q8NB42 609 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 LRRC20Q8TCA0 184 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 GIMAP1Q8WWP7 306 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 GHSRQ92847 366 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 PMM1Q92871 262 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 FERD3LQ96RJ6 166 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 CD180Q99467 661 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 EQTNQ9NQ60 294 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 PRSS16Q9NQE7 514 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 PIPOXQ9P0Z9 390 aa12.08□□□□□ -0.47
SKP2-209ENST00000620197 TRABD2BA6NFA1 517 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 IGLON5A6NGN9 336 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 CFDP00746 253 aaPredicted RBP12.08□□□□□ -0.48
SKP2-209ENST00000620197 TFP02787 698 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 SELENOPP49908 381 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 ACTC1P68032 377 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 ACTA1P68133 377 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 FNDC3BQ53EP0 1204 aaKnown RBP12.08□□□□□ -0.48
SKP2-209ENST00000620197 ARL9Q6T311 187 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 USP53Q70EK8 1073 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 LRRC25Q8N386 305 aaPredicted RBP12.08□□□□□ -0.48
SKP2-209ENST00000620197 SRFBP1Q8NEF9 429 aaKnown RBP12.08□□□□□ -0.48
SKP2-209ENST00000620197 SMPDL3BQ92485 455 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 GAL3ST3Q96A11 431 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 C12orf66Q96MD2 445 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 ZNF436Q9C0F3 470 aaPredicted RBP12.08□□□□□ -0.48
SKP2-209ENST00000620197 MCCC2Q9HCC0 563 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 MED9Q9NWA0 146 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 UCKL1Q9NWZ5 548 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 H2AFY2Q9P0M6 372 aaPredicted RBP12.08□□□□□ -0.48
SKP2-209ENST00000620197 INSL6Q9Y581 213 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 REV3LO60673 3130 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 TBC1D3EA0A087X179 549 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 OR7A10O76100 309 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 PCDH8O95206 1070 aa12.08□□□□□ -0.48
SKP2-209ENST00000620197 HNRNPA1P09651 372 aaKnown RBP eCLIP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms