RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 CLK1P49759 484 aaKnown RBP10.59□□□□□ -0.71
UPF3B-204ENST00000619445 ANXA11P50995 505 aaKnown RBP10.59□□□□□ -0.71
UPF3B-204ENST00000619445 CLNS1AP54105 237 aaKnown RBP10.59□□□□□ -0.71
UPF3B-204ENST00000619445 RASGEF1BQ0VAM2 473 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 CAPRIN1Q14444 709 aaKnown RBP10.59□□□□□ -0.71
UPF3B-204ENST00000619445 PDK3Q15120 406 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 PGS1Q32NB8 556 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 TIGD2Q4W5G0 525 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 NCMAPQ5T1S8 102 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 PDZK1Q5T2W1 519 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 C1QTNF12Q5T7M4 302 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 AP1ARQ63HQ0 302 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 Q71RC1 249 aaPredicted RBP10.59□□□□□ -0.71
UPF3B-204ENST00000619445 BHLHA15Q7RTS1 189 aaPredicted RBP10.59□□□□□ -0.71
UPF3B-204ENST00000619445 GALNT5Q7Z7M9 940 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 LRRN4CLQ8ND94 238 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 OR2W6PQ8NHA6 318 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 DPY30Q9C005 99 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 ZNF350Q9GZX5 532 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 ANKZF1Q9H8Y5 726 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 SSU72Q9NP77 194 aaKnown RBP10.59□□□□□ -0.71
UPF3B-204ENST00000619445 ACER3Q9NUN7 267 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 GIMAP2Q9UG22 337 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 ATRQ13535 2644 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 NPIPA5A0A0B4J1W7 369 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 NPIPA7E9PJI5 369 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 TM9SF1O15321 606 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 TYROBPO43914 113 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 EFNA2O43921 213 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 ADAP00813 363 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 NPIPA8P0DM63 369 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 UQCRC2P22695 453 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 SHC1P29353 583 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 IDUAP35475 653 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 ETV4P43268 484 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 HTR3AP46098 478 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 MAP2K6P52564 334 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 HPCAP84074 193 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF844Q08AG5 666 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 LRRC74AQ0VAA2 488 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 MERTKQ12866 999 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 SKP2Q13309 424 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 GPR68Q15743 365 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 TAB1Q15750 504 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 TIMM23BQ5SRD1 257 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 HEPHL1Q6MZM0 1159 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 WDR93Q6P2C0 686 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 TMPPEQ6ZT21 453 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 NUFIP2Q7Z417 695 aaKnown RBP10.58□□□□□ -0.72
UPF3B-204ENST00000619445 CROCCP2Q86T23 111 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF100Q8IYN0 542 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 TRIML2Q8N7C3 387 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 ATP6V1C2Q8NEY4 427 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 OR5D16Q8NGK9 328 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 OR4A15Q8NGL6 344 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 OR5AK3PQ8NH89 298 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 RFWD2Q8NHY2 731 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 PIWIL2Q8TC59 973 aaKnown RBP10.58□□□□□ -0.72
UPF3B-204ENST00000619445 PMM1Q92871 262 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 TESCQ96BS2 214 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 OR5B2Q96R09 309 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 PSD2Q9BQI7 771 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 GRIP2Q9C0E4 1043 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 BARX1Q9HBU1 254 aaPredicted RBP10.58□□□□□ -0.72
UPF3B-204ENST00000619445 LAMP3Q9UQV4 416 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 HDGFL3Q9Y3E1 203 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 RAP2CQ9Y3L5 183 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 WDR45Q9Y484 360 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 KCNE3Q9Y6H6 103 aa10.58□□□□□ -0.72
UPF3B-204ENST00000619445 SONP18583 2426 aaKnown RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 A0A1W2PP18 115 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 TRIM64A6NGJ6 449 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 TRIM64BA6NI03 449 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 ESPNB1AK53 854 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 OVOL3O00110 214 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 SULT2B1O00204 365 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 SMAD7O15105 426 aaKnown RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 CLOCKO15516 846 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 OIP5O43482 229 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 KIAA0513O60268 411 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 CYP7B1O75881 506 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 DIO1P49895 249 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 KHKP50053 298 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 RPL14P50914 215 aaKnown RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 SESN3P58005 492 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 ABCE1P61221 599 aaKnown RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 GNA13Q14344 377 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 TOMM34Q15785 309 aaPredicted RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF672Q499Z4 452 aaPredicted RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 SYT14P1Q58G82 188 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 OR4F3Q6IEY1 312 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 MTDHQ86UE4 582 aaKnown RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 CMIPQ8IY22 773 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 CIARTQ8N365 385 aaPredicted RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 PIGXQ8TBF5 258 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 AENQ8WTP8 325 aaKnown RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 SMAP2Q8WU79 429 aaPredicted RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 THUMPD3Q9BV44 507 aaKnown RBP10.57□□□□□ -0.72
UPF3B-204ENST00000619445 ALG2Q9H553 416 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 EXOSC3Q9NQT5 275 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms