RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ECHS1P30084 290 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 CLN3Q13286 438 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 EIF2B1Q14232 305 aaKnown RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 CNN3Q15417 329 aaKnown RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 RNASE12Q5GAN4 147 aaKnown RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 METTL2BQ6P1Q9 378 aaKnown RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 AMIGO2Q86SJ2 522 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 AQP11Q8NBQ7 271 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 OR2T33Q8NG76 320 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 OR52E2Q8NGJ4 325 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 SLC41A3Q96GZ6 507 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 URM1Q9BTM9 101 aaKnown RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 SARGQ9BW04 601 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 GRHL1Q9NZI5 618 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 NUFIP1Q9UHK0 495 aaKnown RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 MED26O95402 600 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 HOXD4P09016 255 aaPredicted RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 CNR1P21554 472 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 IMPA1P29218 277 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 TACR3P29371 465 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 GGTLC2Q14390 218 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 NLRP8Q86W28 1048 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 OR4F15Q8NGB8 312 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 CIDECQ96AQ7 238 aaPredicted RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 CCL19Q99731 98 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 RGS6P49758 472 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 SPACA3Q8IXA5 215 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 PGBD5Q8N414 524 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 LILRA3Q8N6C8 439 aaPredicted RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 SFXN5Q8TD22 340 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 MOV10Q9HCE1 1003 aaKnown RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 FBXO8Q9NRD0 319 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 RPL36Q9Y3U8 105 aaKnown RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 SERINC4A6NH21 518 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 OXSR1O95747 527 aaPredicted RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 TNFRSF1AP19438 455 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 GRPRP30550 384 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 OR7E24Q6IFN5 339 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 GDF7Q7Z4P5 450 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 SFTPA1Q8IWL2 248 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 OR2V1Q8NHB1 315 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 APIPQ96GX9 242 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 SAR1AQ9NR31 198 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 YAE1D1Q9NRH1 226 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 TEX264Q9Y6I9 313 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 MAST2Q6P0Q8 1798 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 TNFSF11O14788 317 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 MT-ND1P03886 318 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 MRPL3P09001 348 aaKnown RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 DHRS4L1P0CG22 281 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 ARR3P36575 388 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 VHLP40337 213 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 RAB2AP61019 212 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 AGAP6Q5VW22 663 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 TMEM19Q96HH6 336 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 MS4A7Q9GZW8 240 aaPredicted RBP10.12□□□□□ -0.79
POLR2A-209ENST00000617998 MGAT4AQ9UM21 535 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 SLC22A7Q9Y694 548 aa10.12□□□□□ -0.79
POLR2A-209ENST00000617998 PRAMEF27A3QJZ7 478 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 ZNF12P17014 697 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 OR8G1Q15617 311 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 SLC6A19Q695T7 634 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 KANSL1Q7Z3B3 1105 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 CLMPQ9H6B4 373 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 ZNF701Q9NV72 531 aaPredicted RBP10.11□□□□□ -0.79
POLR2A-209ENST00000617998 TMEM233B4DJY2 109 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 SYT7O43581 403 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 CBX6O95503 412 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 CNOT4O95628 575 aaKnown RBP10.11□□□□□ -0.79
POLR2A-209ENST00000617998 CDH11P55287 796 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 RNF4P78317 190 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 PTGR1Q14914 329 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 C6orf136Q5SQH8 315 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 SAP25Q8TEE9 199 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 NPRL2Q8WTW4 380 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 CLDN23Q96B33 292 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 ZFP64Q9NPA5 681 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 TMEM74BQ9NUR3 256 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 CENPBD1B2RD01 187 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 STT3AP46977 705 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 RPL11P62913 178 aaKnown RBP10.11□□□□□ -0.79
POLR2A-209ENST00000617998 ZCCHC7Q8N3Z6 543 aaKnown RBP10.11□□□□□ -0.79
POLR2A-209ENST00000617998 OR4N2Q8NGD1 307 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 HAVCR1Q96D42 359 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 A0A087WZY1 265 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 OR1E2P47887 323 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 SPANXN2Q5MJ10 180 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 GLT8D1Q68CQ7 371 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 OR4K13Q8NH42 304 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 FBXO27Q8NI29 283 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 UFD1Q92890 307 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 PFDN2Q9UHV9 154 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 ADAMTS6Q9UKP5 1117 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 TP53TG5Q9Y2B4 290 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 ARPC2O15144 300 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 S100A7P31151 101 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 SOX3P41225 446 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 METAP1P53582 386 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 KCNJ10P78508 379 aa10.11□□□□□ -0.79
POLR2A-209ENST00000617998 BTG2P78543 158 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms