RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PABPC4LP0CB38 370 aaKnown RBP13.47□□□□□ -0.25
UBXN1-218ENST00000616865 GGT1P19440 569 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 KDELR2P33947 212 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 ADH7P40394 386 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 DNASE1L1P49184 302 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 FOXO1Q12778 655 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 ZSWIM7Q19AV6 140 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 SLC25A35Q3KQZ1 300 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 KLHL26Q53HC5 615 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 EIPR1Q53HC9 387 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 C1orf185Q5T7R7 199 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 TMEM81Q6P7N7 255 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 VRK2Q86Y07 508 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 TGIF2LYQ8IUE0 185 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 LIX1LQ8IVB5 337 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 ULK2Q8IYT8 1036 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 TMCO5AQ8N6Q1 288 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 BHLHE22Q8NFJ8 381 aaPredicted RBP13.47□□□□□ -0.25
UBXN1-218ENST00000616865 RASSF5Q8WWW0 418 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 LZICQ8WZA0 190 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 DTNBP1Q96EV8 351 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 ZNF597Q96LX8 424 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 RAB3IPQ96QF0 476 aaPredicted RBP13.47□□□□□ -0.25
UBXN1-218ENST00000616865 TRIM15Q9C019 465 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 PCDHAC1Q9H158 963 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 GALNT9Q9HCQ5 603 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 SH2D2AQ9NP31 389 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 CCM2LQ9NUG4 571 aaPredicted RBP13.47□□□□□ -0.25
UBXN1-218ENST00000616865 KLHL28Q9NXS3 571 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 TUBA8Q9NY65 449 aaPredicted RBP13.47□□□□□ -0.25
UBXN1-218ENST00000616865 ST6GALNAC2Q9UJ37 374 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 BOKQ9UMX3 212 aaPredicted RBP13.47□□□□□ -0.25
UBXN1-218ENST00000616865 SLC35A3Q9Y2D2 325 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 WIF1Q9Y5W5 379 aa13.47□□□□□ -0.25
UBXN1-218ENST00000616865 PRRC2AP48634 2157 aaKnown RBP13.47□□□□□ -0.25
UBXN1-218ENST00000616865 ARPC2O15144 300 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 SUSD5O60279 629 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 ZNF682O95780 498 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 UBL4AP11441 157 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 NID1P14543 1247 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 HOXB4P17483 251 aaPredicted RBP13.46□□□□□ -0.25
UBXN1-218ENST00000616865 RPS4Y1P22090 263 aaKnown RBP13.46□□□□□ -0.25
UBXN1-218ENST00000616865 PCBP3P57721 371 aaKnown RBP13.46□□□□□ -0.25
UBXN1-218ENST00000616865 KCNJ10P78508 379 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 C17orf67Q0P5P2 114 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 TRIM25Q14258 630 aaKnown RBP13.46□□□□□ -0.25
UBXN1-218ENST00000616865 MAPK14Q16539 360 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 ARSKQ6UWY0 536 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 ASRGL1Q7L266 308 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 DHFR2Q86XF0 187 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 CMIPQ8IY22 773 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 SMYD1Q8NB12 490 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 OR4K17Q8NGC6 315 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 OR1J4Q8NGS1 313 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 DUSP19Q8WTR2 217 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 SARAFQ96BY9 339 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 ZG16BQ96DA0 208 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 SH3YL1Q96HL8 342 aaPredicted RBP13.46□□□□□ -0.25
UBXN1-218ENST00000616865 TPD52L3Q96J77 140 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 NSMCE2Q96MF7 247 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 RNF145Q96MT1 663 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 PINK1Q9BXM7 581 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 POLDIP3Q9BY77 421 aaKnown RBP13.46□□□□□ -0.25
UBXN1-218ENST00000616865 RPS6KA6Q9UK32 745 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 ACAD8Q9UKU7 415 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 NCKAP5O14513 1909 aa13.46□□□□□ -0.25
UBXN1-218ENST00000616865 CENPVL1A0A0U1RR11 272 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 FAM47E-STBD1D6RA91 191 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 GNB5O14775 395 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 ZNF264O43296 627 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 HCRTR2O43614 444 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 RRP9O43818 475 aaKnown RBP13.45□□□□□ -0.26
UBXN1-218ENST00000616865 GMFGO60234 142 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 HCN1O60741 890 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 MFN2O95140 757 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 NUDT14O95848 222 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 SERPINA1P01009 418 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 KLK2P20151 261 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 PRKAR1BP31321 381 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 CCR4P51679 360 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 TRAP1Q12931 704 aaKnown RBP13.45□□□□□ -0.26
UBXN1-218ENST00000616865 FGFBP1Q14512 234 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 CYBRD1Q53TN4 286 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 MRPL2Q5T653 305 aaKnown RBP13.45□□□□□ -0.26
UBXN1-218ENST00000616865 WLSQ5T9L3 541 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 AP1ARQ63HQ0 302 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 APOOLQ6UXV4 268 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 ZNF771Q7L3S4 317 aaPredicted RBP13.45□□□□□ -0.26
UBXN1-218ENST00000616865 PROX1Q92786 737 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 ASB9Q96DX5 294 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 CLEC4MQ9H2X3 399 aaPredicted RBP13.45□□□□□ -0.26
UBXN1-218ENST00000616865 LIME1Q9H400 295 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 LDAHQ9H6V9 325 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 ZNF703Q9H7S9 590 aaPredicted RBP13.45□□□□□ -0.26
UBXN1-218ENST00000616865 ACTR3BQ9P1U1 418 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 SPRR3Q9UBC9 169 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 B4GALT7Q9UBV7 327 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 KCNE5Q9UJ90 142 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 BAG5Q9UL15 447 aa13.45□□□□□ -0.26
UBXN1-218ENST00000616865 CARD8Q9Y2G2 431 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms