RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 OR5B2Q96R09 309 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 ZNF300Q96RE9 604 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 THUMPD3Q9BV44 507 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 NMUR2Q9GZQ4 415 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 QRSL1Q9H0R6 528 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 LGALS13Q9UHV8 139 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 DPRXA6NFQ7 191 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 C9JVG2 144 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 RNF223E7ERA6 249 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 FCMRO60667 390 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 CYTIPO60759 359 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 CYP7B1O75881 506 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 LYZL6O75951 148 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 NUDT17P0C025 328 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 MATN1P21941 496 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 C21orf58P58505 322 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 RASGEF1BQ0VAM2 473 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 ZNF141Q15928 474 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 BHLHB9Q6PI77 547 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 C6orf120Q7Z4R8 191 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 GTPBP3Q969Y2 492 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 ZNF775Q96BV0 537 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 TRMT61AQ96FX7 289 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 LAT2Q9GZY6 243 aa18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 CHD3Q12873 2000 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 FBN1P35555 2871 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-208ENST00000616074 A0A1W2PP18 115 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 DNAJA2O60884 412 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 BPGMP07738 259 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 CREB1P16220 341 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 STK11Q15831 433 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 PGGHGQ32M88 737 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 PGS1Q32NB8 556 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 OR4F3Q6IEY1 312 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 ZNF75CPQ92670 426 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 SLC35G5Q96KT7 338 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 USB1Q9BQ65 265 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 TRIM2Q9C040 744 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 L2HGDHQ9H9P8 463 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 MKLN1Q9UL63 735 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 LIPT1Q9Y234 373 aa18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 SONP18583 2426 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-208ENST00000616074 CUBNO60494 3623 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 RNF103-CHMP3A0A140T963 221 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 DUXAA6NLW8 204 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 STX11O75558 287 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 UGT2B17O75795 530 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 AK1P00568 194 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 CLDN8P56748 225 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 SESN3P58005 492 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 EMX2Q04743 252 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 FAPQ12884 760 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 MAD2L1Q13257 205 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 ETFDHQ16134 617 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 ARHGAP11BQ3KRB8 267 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 ST8SIA1Q92185 356 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 ARL8AQ96BM9 186 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 ZNF350Q9GZX5 532 aa18.38■□□□□ 0.53
TRAPPC3-208ENST00000616074 ZNF724A8MTY0 619 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 RAMP1O60894 148 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 CSTAP01040 98 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 FESP07332 822 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 UBTFL6P0CB48 400 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 COX5AP20674 150 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 IGHV1-2P23083 117 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 IDUAP35475 653 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 ACVR1BP36896 505 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 DIO1P49895 249 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 CASP9P55211 416 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 IFFO1Q0D2I5 559 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 MERTKQ12866 999 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 PPA1Q15181 289 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 DNAJC14Q6Y2X3 702 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 REG4Q9BYZ8 158 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 SLCO5A1Q9H2Y9 848 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 OR51I1Q9H343 314 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 ASIC5Q9NY37 505 aa18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 NOP53Q9NZM5 478 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-208ENST00000616074 NDUFS7O75251 213 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 CRLF1O75462 422 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 IGHV4-39P01824 125 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 THBS1P07996 1170 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 PGCP20142 388 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 ETV4P43268 484 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 DMTNQ08495 405 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 PDCD2Q16342 344 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 MAPK14Q16539 360 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 SYT14P1Q58G82 188 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 ABLIM2Q6H8Q1 611 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 HEPHL1Q6MZM0 1159 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 TMPPEQ6ZT21 453 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 C16orf62Q7Z3J2 963 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 GALNT5Q7Z7M9 940 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 OR4A15Q8NGL6 344 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 PPP1R36Q96LQ0 422 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 TRAF4Q9BUZ4 470 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 SERINC1Q9NRX5 453 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 CISD1Q9NZ45 108 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 NPAP1Q9NZP6 1156 aa18.36■□□□□ 0.53
TRAPPC3-208ENST00000616074 COL6A5A8TX70 2615 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms