RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 MEX3DQ86XN8 651 aaKnown RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ADGRG3Q86Y34 549 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF619Q8N2I2 560 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 RBM15BQ8NDT2 890 aaKnown RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 OR10A6Q8NH74 314 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 OR5B2Q96R09 309 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 GPATCH1Q9BRR8 931 aaKnown RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 A0A1W2PNV4 684 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 SLC22A20A6NK97 555 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 AHRRA9YTQ3 701 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 TMEM229AB2RXF0 380 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 IL2RAP01589 272 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 IL7RP16871 459 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 SMSP52788 366 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 MERTKQ12866 999 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ZCCHC12Q6PEW1 402 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 SNX32Q86XE0 403 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 CNPY4Q8N129 248 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 GTPBP8Q8N3Z3 284 aaPredicted RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 RNF148Q8N7C7 305 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 VPS37AQ8NEZ2 397 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ZBTB18Q99592 522 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 CCDC106Q9BWC9 280 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 SAP130Q9H0E3 1048 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ENKD1Q9H0I2 346 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 PTGES2Q9H7Z7 377 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 KCNJ16Q9NPI9 418 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ITGB1BP2Q9UKP3 347 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 SNX13Q9Y5W8 968 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 A0A1W2PP18 115 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 TMEM72A0PK05 275 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 M0R3H8 397 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 PGM3O95394 542 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ACTL6AO96019 429 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 THY1P04216 161 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 KHKP50053 298 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF41P51814 821 aaPredicted RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ARFIP2P53365 341 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 PSMD4P55036 377 aaKnown RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 KLF10Q13118 480 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 C9orf135Q5VTT2 229 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 HBMQ6B0K9 141 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 AAGABQ6PD74 315 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 CADM2Q8N3J6 435 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 FAM156AQ8NDB6 213 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 FAM71CQ8NEG0 241 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 GPR32P1Q8NGA4 272 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 OR52P1PQ8NH57 321 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 OR5W2Q8NH69 310 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 PHF10Q8WUB8 498 aaKnown RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 ITCHQ96J02 903 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 HS3ST6Q96QI5 342 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 CPPED1Q9BRF8 314 aaPredicted RBP5.09□□□□□ -1.59
CPNE3-208ENST00000614678 RNF122Q9H9V4 155 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 CALHM2Q9HA72 323 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 PRSS50Q9UI38 385 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 DSPPQ9NZW4 1301 aa5.09□□□□□ -1.59
CPNE3-208ENST00000614678 A0A1W2PQD3 144 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 SMAD9O15198 467 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 TGDSO95455 350 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 CGAP01215 116 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 NGFRP08138 427 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 IMPDH2P12268 514 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 RPS4Y1P22090 263 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 TACR3P29371 465 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ADSLP30566 484 aaPredicted RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 EEF1A1P68104 462 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 RPP38P78345 283 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 DPY19L1Q2PZI1 675 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 LRIF1Q5T3J3 769 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ENPP6Q6UWR7 440 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 MTDHQ86UE4 582 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ZPLD1Q8TCW7 415 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 RCN3Q96D15 328 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 CCDC28BQ9BUN5 200 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 RYDENQ9NUL5 291 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 OSGIN1Q9UJX0 560 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 CDHR4A6H8M9 788 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 CD8B2A6NJW9 211 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 CHMP24386 653 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 TIMP3P35625 211 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 GZMMP51124 257 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 TLE4Q04727 773 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 EGR4Q05215 589 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 SQLEQ14534 574 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 RUNDC3AQ59EK9 446 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 NANOGP8Q6NSW7 305 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 WDR88Q6ZMY6 472 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 PLEKHM3Q6ZWE6 761 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 DHDDSQ86SQ9 333 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 DMRTC2Q8IXT2 367 aaPredicted RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 GLB1L3Q8NCI6 653 aaPredicted RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 C7orf57Q8NEG2 295 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF563Q8TA94 476 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 WFIKKN1Q96NZ8 548 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 NANOGQ9H9S0 305 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 MRTO4Q9UKD2 239 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 A0A096LPI6 279 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 A8MXE2 369 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 299.5 ms